Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00042 ATGAACAACACGGCCCAGCCGGGAAACATGGCCGCCGGATCCCCGCCATGGCTGAACACCGGCGACAACTCTTGGCAAATTACAGCCTCCACTCTCGTCGGACTTCAGAGCATGCCTGGCCTTGTGATTCTCTACGCCAGCATCGTCAAAAAGAAATGGGCTGTCAATTCTGCCTTTATGGTCCTCTACGCCTTCGCCGCCGTTCTAATTTGTTGGGTCCTCGTCGGTTACCGAATGGCCTTTGGCGACCAGCTGGTTCCTCTGTGGGGCAAAGGGATTCCAGCTCTGACCCAAAGTTACCTAATTGACCGAGCCAATATCCCCGAGAGTGGCAATACAAACAACGATGGAAGGGTAACGCTCAGAATTGAACCCAATATTCCGATGGCTTCGCTTGTGTATTTCCAGTTCACTTTTGCTGCGATTACGGTGATTTTACTGGCTGGCTCTGTTCTTGCAAGAATGAACATCAAAGCTTGGATGGCGTTTGTTCCTCTTTGGGTAATTTTCGCATACACCGTCGGAGCATATTCTGTTTGGGGCGGAGGATTTCTCTTTCAATGGGGCGTAATTGATTACTCCGGCGGCTACGTGATCCATCTCTCTTCAGGGATTGCTGGCCTGACCGCCGCTTATTGGGTTGGGCCGAGGATTAAGAGTGACAGGGAGAGGTTTCCGCCCAATAACGTACTGCTGATGCTGGCCGGAGCAGGGCTGCTGTGGATGGGATGGTCTGGATTTAACGGCGGGGCGCCGCACTCGGCGAACGTGGTCGCGTCGATAGCTGTGCTGAATACGAACGTGAGCGCCGCGACGAGCCTGCTGGTGTGGACCATTTTGGACGTATTGTACTTTGGGAAGCCATCGGTGATTGGAGCCATTCAGGGTATGATGACTGGCTTGGCTTGCGTTACTCCCGGCGCAGGTAATTTTTGA 936 53.31 MNNTAQPGNMAAGSPPWLNTGDNSWQITASTLVGLQSMPGLVILYASIVKKKWAVNSAFMVLYAFAAVLICWVLVGYRMAFGDQLVPLWGKGIPALTQSYLIDRANIPESGNTNNDGRVTLRIEPNIPMASLVYFQFTFAAITVILLAGSVLARMNIKAWMAFVPLWVIFAYTVGAYSVWGGGFLFQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRIKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPHSANVVASIAVLNTNVSAATSLLVWTILDVLYFGKPSVIGAIQGMMTGLACVTPGAGNF 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 211056 213078 + CmoCh14G000420.1 Cmo14g00042 395308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00042 311 Gene3D Ammonium transporter AmtB like domains 2 311 IPR029020 -
Cmo14g00042 311 SUPERFAMILY Ammonium transporter 17 310 - -
Cmo14g00042 311 Pfam Ammonium Transporter Family 25 309 IPR024041 GO:0008519|GO:0016020|GO:0072488
Cmo14g00042 311 PRINTS Rhesus blood group protein signature 262 284 IPR002229 GO:0005887
Cmo14g00042 311 PRINTS Rhesus blood group protein signature 136 152 IPR002229 GO:0005887
Cmo14g00042 311 PRINTS Rhesus blood group protein signature 231 249 IPR002229 GO:0005887
Cmo14g00042 311 PANTHER AMMONIUM TRANSPORTER MEP2 10 309 IPR001905 GO:0008519|GO:0016020|GO:0072488
Cmo14g00042 311 ProSitePatterns Ammonium transporters signature. 192 217 IPR018047 GO:0008519|GO:0016020|GO:0072488
Cmo14g00042 311 PANTHER AMMONIUM TRANSPORTER 2 10 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00418 Cmo-Chr5:1926187 Cmo14g00042 Cmo-Chr14:211056 6.93E-125 dispersed
Cmo08g01012 Cmo-Chr8:6583834 Cmo14g00042 Cmo-Chr14:211056 1.24E-08 dispersed
Cmo14g00042 Cmo-Chr14:211056 Cmo02g01754 Cmo-Chr2:10037187 6.99E-08 dispersed
Cmo14g00042 Cmo-Chr14:211056 Cmo06g00209 Cmo-Chr6:1128381 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00042 K03320 - csv:101207321 565.459