Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00064 ATGGCTTCCTGTTGCTTTGCAATCCTGAATTGCTGTAAAGGAAATAGCAGCTCAGAAGAACCGGCAGAAGGGATTGCTGTTAACAACAATGTACGCATCTTTTCTTATAATTCACTGAGGTCAGCCACTAGTAATTTTCATCCATCAAGCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTGAGGGATGGTACCAATGTTGCAGTAAAATCACTGTCTGCAGAATCTACCCAGGGAACTCGTGAATTTTTAACCGAGATAAATATGATATCAGATATAAGACATCAAAATCTAGTTGAACTGATCGGTTGTTGCGTCGAAGGCACGCATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAATACTTTGCTTGGTTCATTGAGTAAGGATGTCGTTCTGGATTGGCCAATGAGAGCTAAGATTTGTCTCGGTACAGCTTTGGGTCTTGCATTTCTGCATGAGGAAGCTGAACCGTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCGGACAACGTTACTCATGTTAGTACTCGAGTGGCCGGAACTGTTGGATATTTGGCTCCCGAGTATGCACTCTTAGGACAGTTGACAAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAGTAATCAGTGGAAGTAGCAGCACCAAGGCAGCATTTGGAGAAGAGTTGTTGATTCTCGTGGAATGGACTTGGAAATTAAAACAAGAAGGACGGCTCGTAGAACTCATTGATCCGGAACTGATCAATTATCCAAAGGCCGAGGTGGTGCGTTTCATTACGGTTGCACTCTTCTGTACCCAAGCAGCAGCAAATCAAAGGCCAACCATGAAGCAGGTCGTGGAAATGCTTTCAAGAGAGGTACACCTTAACGAAAAACTACTGACAGAGCCTGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGGTGCTGCTGCTGCTTCTATTTCTGGGGGAACATCCTCCTCCCATGGAATCAAATATAAAAAAGCTATGAAGACTTCTCCATCTTCATCTCAATTTAACAGCTCAAACAGTCTGACTCAAATGCTTCCTAGGGTTGCTGCTGCACTTGCTTGGGAATAA 1188 42.93 MASCCFAILNCCKGNSSSEEPAEGIAVNNNVRIFSYNSLRSATSNFHPSSRIGAGGYGVVYKGVLRDGTNVAVKSLSAESTQGTREFLTEINMISDIRHQNLVELIGCCVEGTHRILVYEYLENNSLANTLLGSLSKDVVLDWPMRAKICLGTALGLAFLHEEAEPSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEVISGSSSTKAAFGEELLILVEWTWKLKQEGRLVELIDPELINYPKAEVVRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNGGAAAASISGGTSSSHGIKYKKAMKTSPSSSQFNSSNSLTQMLPRVAAALAWE 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 322454 325972 + CmoCh14G000640.1 Cmo14g00064 395330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00064 395 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 380 - -
Cmo14g00064 395 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Cmo14g00064 395 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00064 395 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 3 380 - -
Cmo14g00064 395 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Cmo14g00064 395 SMART serkin_6 46 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00064 395 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672|GO:0006468
Cmo14g00064 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Cmo14g00064 395 Gene3D Phosphorylase Kinase; domain 1 16 121 - -
Cmo14g00064 395 SUPERFAMILY Protein kinase-like (PK-like) 26 316 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00679 Cmo-Chr4:3370962 Cmo14g00064 Cmo-Chr14:322454 3.37E-116 dispersed
Cmo14g00064 Cmo-Chr14:322454 Cmo04g00711 Cmo-Chr4:3519505 2.03E-104 dispersed
Cmo18g00338 Cmo-Chr18:2216363 Cmo14g00064 Cmo-Chr14:322454 1.50E-76 dispersed
Cmo14g00064 Cmo-Chr14:322454 Cmo18g00337 Cmo-Chr18:2202972 1.75E-123 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74815 PF07714 PK_Tyr_Ser-Thr 4.60E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00064 - - csv:101218048 667.151