Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00135 ATGGATCCACGCTTTACACGACAAGCTGGTTCCACGAATGAAATTCTTATAGGTAATCGCCCCTTTGCGGTTCAAGCACAAGAGAATGCTCTTGGAAGGCCCATGTTTCAGGATACCGTTTTGAGTCATAACTTTGAAGAATTTAATTGCTTTCCTCTCGATCCATCGCCGAATAACATGGCCTCAAGTTCCAGTATTAGAACCTCATCTTCTAATGAGGCGAGCCATGAGGAAGATTATCTGGAAGATTACGATTTCTCTGATGCTGTTTTGAGATTCATTAATCAGATTCTCATGGAAGAAGATATGGAGGACAAGACTTGCATGCTTCAAGATTCTTTGGATCTTCAAGCTGCTGAGAAATCATTCTACGAGGTCCTTGGAAAAAAGTATCCTCCTTCTCCAGAACCGAATAGATCTCTGGCCAATCAATACAGTGATAGCTTCTATGAAGAACTTTGTGGAGATAGTATTAATTGCCTGAATAGTTATCGTAATACTTTTTATTATGGTGATGATAACCCTTTTCAAAGTCTGAGTGAGGATGTATTTCAAATCAGAAGCACTTTAGATGATATCATTTCTCCATCATCTCATAGCTCCTCGAATAGTATTATTAGTGGGGCTGATGGGTGGGTGGACTTCTCGAATAATACAATTCTAGTCCCTGAGCCTAATAACAGAAGCCAATCCATTTGGCAGTTTCAAAAAGGGTTTGAAGAGGCAAGCAAATTTTTACCTGGTGAAAACAACTTGTGTCTTGATTTTGAGGTAAATGAGCCAGCAACTCAGGGTCCGGAGGAGGAAACGAGCGAGATATATTTGAAGGCAGGAAGAAAGGATCAGAAGAGTGTTTTGTCACTTGAATCACGTGGAAGAAAGAATCCTCATGATGAGGATGGAGATTTGGAAGAAGAGAGATGCCGCAAGCAAGCAGCTCTATTTACAGAGTCAACCTTGCGATCTAAGATGTTTGATATTGTGTTGCTTTGTAGTGCAGGGGAGGGGCGTGAACGGTTAGTTTCATTTCGACAGGAATTACAGAATGCTAAAATCAAAAGCATGCTGCAGAATGGGCAACTAAAAGAGTTTAGAGGTGGGAGGGGTCGTCGGAAGAAGCATAGTGGGAAAAAGGAGGTAGTGGATTTGAGAACTCTTCTAATTAGCTGTGCTCAAGCTATAGCAGCTGATGACCATAGGAATGCCAGTGAGCTTCTAAAGAAGATCAGGCAACATGCTTCTCCTTTTGGGGATGGAAATCAGAGGTTGGCTAGTTGTTTTGCTGATGGTCTGGAGGCACGCTTGGCAGGTACTGGTAGCCAGATTTACAAAGGTCTAGTTAATAAAAGAACATCTGCTGCCGATGAATTGAAAGCTTACCACTTGTACCTTGCTGCATGCCCATTTAGAAAGATCTCTAATTTTACTTCAAACAGGACTATAATGATTGCTGCAGAGAATGCAACGAAGCTTCATGTCATAGATTTTGGTATCCTTTACGGTTTCCAGTGGCCTACTTTAATCCAGAGATTGTCATGGAGAGAAGGTGGACCTCCAAGGCTTCGAATTACTGGAATAGAATTTCCCCAGCCTGGATTTCGTCCTGCGGAGAGAGTTGAGGAGACAGGTCGTCGCTTGGCGGCCTATGCAGAGAGTTTCAACGTGCCATTTGAGTATAATGCTATAGCAAAAAAATGGGAAAATATTTCTGTGGAAGAACTCAATATCCATCAAGATGAGTTCCTCGTTGTGAACTGTTTGTATCGAGCAAAAAATTTGTCTGATGAAAGTGTTGCCACAGAGAGTGCCAGAAGTTCAGTTTTTAGATTGATACGCAAAATTAAACCCAACTTATTCATCAGTGGCGTTGTCAACGGGGCATACAATGCACCTTTCTTCGTTACCCGATTTCGAGAGGCATTGTTTCACTTTTCTGCTATCTTTGATATGCTTGAAACTGTTGTACCTCGTGAGGATTGGGAGAGAATGCTGTTGGAGAGAGAGATCTTTGGCAGGGAGGCTTTAAATGTTATAGCATGTGAGGGATGGGAGAGAGTGGAAAGACCAGAAACATACAAGCAGTGGCAATTTTGGATCATGAGGGCTGGATTTGTGCAACTGCCTTTTTATCCTGAGATTTTTGAGAGAGCAGTTGAAAAGGTGCGGTCAAGTTACCACAGAGATTTTTTGATTGATGAAGATAGTAGATGGATACTGCAGGGATGGAAAGGTCGAATTATATATGCCATCTCTGCATGGAAACCTGCTGCAGAGTAA 2277 42.03 MDPRFTRQAGSTNEILIGNRPFAVQAQENALGRPMFQDTVLSHNFEEFNCFPLDPSPNNMASSSSIRTSSSNEASHEEDYLEDYDFSDAVLRFINQILMEEDMEDKTCMLQDSLDLQAAEKSFYEVLGKKYPPSPEPNRSLANQYSDSFYEELCGDSINCLNSYRNTFYYGDDNPFQSLSEDVFQIRSTLDDIISPSSHSSSNSIISGADGWVDFSNNTILVPEPNNRSQSIWQFQKGFEEASKFLPGENNLCLDFEVNEPATQGPEEETSEIYLKAGRKDQKSVLSLESRGRKNPHDEDGDLEEERCRKQAALFTESTLRSKMFDIVLLCSAGEGRERLVSFRQELQNAKIKSMLQNGQLKEFRGGRGRRKKHSGKKEVVDLRTLLISCAQAIAADDHRNASELLKKIRQHASPFGDGNQRLASCFADGLEARLAGTGSQIYKGLVNKRTSAADELKAYHLYLAACPFRKISNFTSNRTIMIAAENATKLHVIDFGILYGFQWPTLIQRLSWREGGPPRLRITGIEFPQPGFRPAERVEETGRRLAAYAESFNVPFEYNAIAKKWENISVEELNIHQDEFLVVNCLYRAKNLSDESVATESARSSVFRLIRKIKPNLFISGVVNGAYNAPFFVTRFREALFHFSAIFDMLETVVPREDWERMLLEREIFGREALNVIACEGWERVERPETYKQWQFWIMRAGFVQLPFYPEIFERAVEKVRSSYHRDFLIDEDSRWILQGWKGRIIYAISAWKPAAE 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 586514 588790 - CmoCh14G001350.1 Cmo14g00135 395401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00135 758 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 35 755 IPR005202 -
Cmo14g00135 758 ProSiteProfiles GRAS family profile. 374 754 IPR005202 -
Cmo14g00135 758 MobiDBLite consensus disorder prediction 285 305 - -
Cmo14g00135 758 PANTHER SCARECROW-LIKE PROTEIN 9 35 755 - -
Cmo14g00135 758 Pfam GRAS domain family 383 754 IPR005202 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00292 Cmo14g00135 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00114 Cmo-Chr13:643198 Cmo14g00135 Cmo-Chr14:586514 0 dispersed
Cmo14g00135 Cmo-Chr14:586514 Cmo20g00673 Cmo-Chr20:3276967 2.04E-69 dispersed
Cmo01g00641 Cmo-Chr1:3281533 Cmo14g00135 Cmo-Chr14:586514 1.41E-14 wgd
Cmo14g00135 Cmo-Chr14:586514 Cmo02g00793 Cmo-Chr2:4900767 0 wgd
Cmo14g00135 Cmo-Chr14:586514 Cmo20g00427 Cmo-Chr20:2014095 0 wgd
Cmo14g00135 Cmo-Chr14:586514 Cmo06g00292 Cmo-Chr6:1456180 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10901 PF03514 GRAS 1.30E-115 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00135 - - csv:101205887 1268.45