Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00147 ATGAATTTCTCCTCCATTCCTCCTTATCTTGATCCTTCCAACTGGCACCAGCAACTCACCCATCAACTGGGAACCACCACCACCGGAGTTAGCTCTCAGCTCCTTCCTCCACCCCCTCCTCCGCCTCCTCCCCCACCTCCCCCTCCCCCCCATGGCGTCGGTGCTCCCACTTCCATCCGCCCCGGTTCGATGGCCGAGCGAGCTCGAATGGCTAATATTCCCATGCCTGAGGCAGCATTGAAATGCCCAAGATGTGATTCAACCAACACTAAGTTCTGCTACTTCAACAATTACAGCCTCACTCAACCTCGCCACTTTTGTAAGACATGTCGAAGGTACTGGACTAGAGGTGGAACGCTGCGAAGCGTTCCGGTCGGGGGCGGGTGCCGGAGAAACAAAAGAAGCAAAGGGAGAAGTTCCAAGTCGCCGCCGGTCAGTTCCGACCGACAACAAACCTGTGGTTCAGGGAATTCCTCATCGAGTGCAATAGCTTCCAACAATAGTGGAGGTCTTTCCCCACAGATTCCACCTCTCCGCTTCATGGCTCCTCTCCACCAACAACTCAGCGACTTCGACATCGGTGGCTTCAACTACGGTGGTGGCCTCTCAGCTCCGGCCACCGTTACCGGCGACCTGAATTTTCAATTGGGCAACACTAATTTAGGTGGAGGAACAAGCATTGGATCTCTCTTGGGATTTGACCAACAATGGCGGCTCCAACAACAAGCTCCTCAATTTCCCTTCTTTTCCGGGTTAGACCCTTTCGACGGTGGTAGCGGTAGCGGCGGTGACGGACCCAGCTGGGAAATGAGGCAAAAATTACCATCAAGCTCAAGGAATTTAACCCAAATGGGGAATTCAGTAAAAATGGAAGAAACCCCAGATCAAGGTAATAACATTGGAAGACAATTAGTTGGCAATGAACAATATTGGAGCAGCGGATCAATGGGATGGTCGGATCCTTCTGGTTTCAGTTCTTCATCTTCAACAAGAAACCCATTATAG 1005 51.74 MNFSSIPPYLDPSNWHQQLTHQLGTTTTGVSSQLLPPPPPPPPPPPPPPPHGVGAPTSIRPGSMAERARMANIPMPEAALKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGTLRSVPVGGGCRRNKRSKGRSSKSPPVSSDRQQTCGSGNSSSSAIASNNSGGLSPQIPPLRFMAPLHQQLSDFDIGGFNYGGGLSAPATVTGDLNFQLGNTNLGGGTSIGSLLGFDQQWRLQQQAPQFPFFSGLDPFDGGSGSGGDGPSWEMRQKLPSSSRNLTQMGNSVKMEETPDQGNNIGRQLVGNEQYWSSGSMGWSDPSGFSSSSSTRNPL 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 642536 644189 + CmoCh14G001470.1 Cmo14g00147 395413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00147 334 ProSiteProfiles Zinc finger Dof-type profile. 80 134 IPR003851 GO:0003677|GO:0006355
Cmo14g00147 334 MobiDBLite consensus disorder prediction 271 334 - -
Cmo14g00147 334 MobiDBLite consensus disorder prediction 139 169 - -
Cmo14g00147 334 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 4 330 IPR045174 GO:0003700|GO:0006355
Cmo14g00147 334 ProSitePatterns Zinc finger Dof-type signature. 82 118 IPR003851 GO:0003677|GO:0006355
Cmo14g00147 334 Pfam Dof domain, zinc finger 79 134 IPR003851 GO:0003677|GO:0006355
Cmo14g00147 334 PANTHER DOF ZINC FINGER PROTEIN DOF3.6 4 330 - -
Cmo14g00147 334 SUPERFAMILY Formin homology 2 domain (FH2 domain) 39 47 - -
Cmo14g00147 334 MobiDBLite consensus disorder prediction 33 55 - -
Cmo14g00147 334 MobiDBLite consensus disorder prediction 24 60 - -
Cmo14g00147 334 MobiDBLite consensus disorder prediction 121 169 - -
Cmo14g00147 334 MobiDBLite consensus disorder prediction 248 334 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g00443 Cmo14g00147 CCT
Cmo03g00443 Cmo14g00147 ECH
Cmo06g00304 Cmo14g00147 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02761 Cmo-Chr4:19969703 Cmo14g00147 Cmo-Chr14:642536 4.38E-58 dispersed
Cmo13g00132 Cmo-Chr13:757753 Cmo14g00147 Cmo-Chr14:642536 1.49E-52 dispersed
Cmo13g00205 Cmo-Chr13:1576500 Cmo14g00147 Cmo-Chr14:642536 6.44E-39 dispersed
Cmo16g00799 Cmo-Chr16:4073345 Cmo14g00147 Cmo-Chr14:642536 7.81E-34 dispersed
Cmo01g00618 Cmo-Chr1:3189631 Cmo14g00147 Cmo-Chr14:642536 4.57E-58 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo15g00409 Cmo-Chr15:1861731 1.72E-48 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo02g00815 Cmo-Chr2:4986104 2.03E-39 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo20g00451 Cmo-Chr20:2102972 7.71E-42 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo03g00443 Cmo-Chr3:5025083 8.57E-52 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo04g00221 Cmo-Chr4:1111117 7.89E-46 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo04g01262 Cmo-Chr4:6404620 9.06E-52 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo06g00304 Cmo-Chr6:1499655 2.00E-143 wgd
Cmo14g00147 Cmo-Chr14:642536 Cmo07g01030 Cmo-Chr7:5100192 5.56E-33 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10903 PF02701 zf-Dof 6.10E-32 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00147 - - cpep:111791192 508.834