Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00163 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCTAGGTATTCGATCTCGTCCCCGTCGAGATCTCCGGCCTTGACTCCTCGGCGGAGCTTCAACGATGCGATGATCGAACAGAGCATCGAATCTGCGGCGGCGATTGTGATGAAATGGAATCCGGATTCTTCAACTTATGCTAAAGTTACTTCGATGTTTTATGAAGACAGAAACGAAGCCATGCAGTTCATTAAGCGCGTGAATGATCTTCAAAAAGCGATGCATCTGATGGTTTCGGAAGATTCCGGTTTCGCTTCCGATAGGCTTGTTTACGCTCAAGGTTTGATGGAAATCGCAATGAAAAGGCTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAACCGCGCTCATCTCGATCCGGAATCTGTTTCGGCTCGATCCTCCCGCTGCTCCACTAGATCGAGCACTTCCGCCGATTTCGACGATGACGGAACCCTAGACGATGAAGTCCAAGTCGTAGGCGATTCGATCGCTGAGGTTGAGCAAGTTTCGTCCATCGTTATGGAGGATTTACGAACCATAGCTGAGTGCATGATCTCATCTGGATACGCTAAAGAGTGCGTTAATATGTACAAAGTGATTCGAAAATCGATTATCGATGAGGGTGTGTACCGCCTCGGTCTTGAGAAATTGAGCCCTTCGCGAATCAACAAGATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACGCTGTTCGTTGGCGAACGAATTCTCTGCGACAACGTTTTTTCCTCGTCTGAATCGATTAGAGAATCCTGTTTTGCTGATATATCCAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTAGCTAAGAGTAAAAAATCTCCGGAGAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCGCCGAAAATTGGCCGGAGATCGAATCGATTTTCTCGTCTGAGTCCTCATCTGTAGTTCGATCTCAAGCTCTGACCTCACTCGCGAAGCTTGGCGAGTTAGTCCGTGCCATAGTAATGGATCTCGAATTCTCAATTCAGAAGAATTCATCCAAATCGCCGGTCGCTGGCGGAGGTGTTCATTCTTTAACGCTTCTCTCAATGAACTACCTCACTTTCCTCGCCGATTACGGCAACGTTTTGACGGATATTTTCGTCGATTGGATTCCGCAAGACAAGTCCTCTCTGGAACAAATTTTCTTCGGCAGTTCAGACTCCGACGATTCTCCAACGGCTTCTGCAATCTCTTTGCGAATGGGATGGTTAATTCTAGTCCTACTCTGCAAACTCGACAGCAAAGCGAAACGATACAAAGACGTTTCACTCTCGTATCTATTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCATTACCTTCTCGGCGACGAGTGGATCGCGAAGCACGAGGCCAAAGTAAGGCAATTTGCAGCCAAATACGAGGCATTGGCTTGGGGCAGAGTCTTTGATTCCTTGCCGGAGAATCCAACCGAGAAATTTTCACAAGAGGAAGTCAAAGAAATCTTCAGGAACTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCCTGCTTCATTCCTGATCCAAAGCTTCGAGACGAAGTTAAACTATCAATCGGTAGGAAGCTCGTTTCGTTCTATGGAGAATTTTACAGAGCGCAGAAAGCTTACGCCGGTGCTATTGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTCTCAGATCTCTATTTTGAACCGTCAGATTGGGCGAGCGTTTCCACCTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGCCCCCGTTAA 1920 46.82 MPRKGMRSLLFQFSSPSNSISRYSISSPSRSPALTPRRSFNDAMIEQSIESAAAIVMKWNPDSSTYAKVTSMFYEDRNEAMQFIKRVNDLQKAMHLMVSEDSGFASDRLVYAQGLMEIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSTSADFDDDGTLDDEVQVVGDSIAEVEQVSSIVMEDLRTIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSPSRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDNVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSIAENWPEIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEFSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNVLTDIFVDWIPQDKSSLEQIFFGSSDSDDSPTASAISLRMGWLILVLLCKLDSKAKRYKDVSLSYLFLANNLQHIVSKVRSSNLHYLLGDEWIAKHEAKVRQFAAKYEALAWGRVFDSLPENPTEKFSQEEVKEIFRNFNMAFQETHRKQKSCFIPDPKLRDEVKLSIGRKLVSFYGEFYRAQKAYAGAIEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 726507 728426 + CmoCh14G001630.1 Cmo14g00163 395429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00163 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 622 IPR004140 GO:0000145|GO:0006887
Cmo14g00163 639 MobiDBLite consensus disorder prediction 617 639 - -
Cmo14g00163 639 MobiDBLite consensus disorder prediction 144 159 - -
Cmo14g00163 639 Pfam Exo70 exocyst complex subunit 249 609 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cmo14g00163 639 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 622 - -
Cmo14g00163 639 Gene3D Exocyst complex component Exo70 56 617 - -
Cmo14g00163 639 SUPERFAMILY Cullin repeat-like 76 611 IPR016159 -
Cmo14g00163 639 MobiDBLite consensus disorder prediction 142 165 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00163 Cmo-Chr14:726507 Cmo01g00011 Cmo-Chr1:36167 7.33E-97 dispersed
Cmo14g00163 Cmo-Chr14:726507 Cmo02g00840 Cmo-Chr2:5099790 0 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo20g00472 Cmo-Chr20:2180937 1.48E-173 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo04g00251 Cmo-Chr4:1243469 0 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo04g01289 Cmo-Chr4:6535475 4.34E-177 wgd
Cmo14g00163 Cmo-Chr14:726507 Cmo07g01009 Cmo-Chr7:4983705 1.04E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00163 K07195 - csv:101208543 1076.62