Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00170 ATGGTTAAACCATGCTGGAAGCCTCACGATGATGGTGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGGCAATTCTCCATGGCAGTAATCCAAGCTAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCTTTGAGTATGACCAACCCAGGTCCGCAGGGGACCTTTGTTGGAGTTTATGACGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAACGACAATCTCTTCAGCAATCTCAAAAGATATGTATCTTTGCACCAAAACATATCTGAAAACGCTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGAGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCCAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTTTATATTGCCAACGCAGGCGATTCTCGAGCAGTGCTTGGGAGAACCGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATCGAATCAGTGAGAGATGAACTACGGATGTTTCATCCAGAAGATCCTCAGATTGTGGTCCTAAAGCACAATGTGTGGCGTGTTAAAGGTATCATACAGATTTCAAGATCCATAGGTGATGCATATTTAAAAAAGGCAAAGTTCAACAGACCTCCTCTGCCACCTAAATTTCAACTGCCTGAGCCATTTTACAAACCAATCCTCAGTGCAGAACCGTCGATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCTCGAAATGGAATAGCAAGGAGACTTATCAAGGCTGCACTTCGAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCCGACCTGAAAAAGATAGATAGAGGTGTGCGAAGGCATTTCCATGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCAGTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTGTCAATCAGAGGAGGAGAAGGTCTCCCTACGTCAGCAAACTCCTAG 1113 45.19 MVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYVSLHQNISENAIRKAFAATEEEFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRAVLGRTERATREVIAIQLSTEHNASIESVRDELRMFHPEDPQIVVLKHNVWRVKGIIQISRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLIKAALREAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPQLINGRPSPCSLSIRGGEGLPTSANS 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 759883 761720 + CmoCh14G001700.1 Cmo14g00170 395436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00170 370 Gene3D - 23 349 IPR036457 -
Cmo14g00170 370 CDD PP2Cc 32 342 IPR001932 -
Cmo14g00170 370 SUPERFAMILY PP2C-like 33 343 IPR036457 -
Cmo14g00170 370 SMART PP2C_4 12 340 IPR001932 -
Cmo14g00170 370 PANTHER PROTEIN PHOSPHATASE 2C 67-RELATED 3 364 - -
Cmo14g00170 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 342 IPR001932 -
Cmo14g00170 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 364 - -
Cmo14g00170 370 Pfam Protein phosphatase 2C 64 311 IPR001932 -
Cmo14g00170 370 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00170 Cmo-Chr14:759883 Cmo20g00737 Cmo-Chr20:3678588 0 dispersed
Cmo14g00170 Cmo-Chr14:759883 Cmo04g00262 Cmo-Chr4:1306617 0 wgd
Cmo14g00170 Cmo-Chr14:759883 Cmo04g01302 Cmo-Chr4:6609446 0 wgd
Cmo14g00170 Cmo-Chr14:759883 Cmo06g00334 Cmo-Chr6:1625882 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00170 K01102 - csv:101210750 704.131