Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00177 ATGGAGACTAAGCTTCTGCTTCTTCTTCTTCTCTTTCTTTTCCACGCATGCTTTGCTCAGATGCCAGGGTTTGTAAGTTTGGACTGTGGAGGTCAAGAAAGTTTCACTGACGATATTGGTCTGGAGTGGGTTCCAGATACTCAAATTCGTTTTGGAGAAGCAATTAACATTTCTGTTGCAAATGAGACAAAGAAGCAATATTTGACCTTAAGACACTTCCCTGCTGATTCCAGGAAGTACTGCTACTCACTCAATGTTACTAGTAGAACACGTTACCTTCTCAGAGCAACATTTTTATATGGTAACTTCGACAATAACAACGTGTATCCAAAATTTGATATTTCCCTTGGGGCAACTCACTGGTCAACAATTGTCATATCTGATGCCAACACTATAGAAGTTCGAGAGCTCATATTTCTGGCTTCAACTCCAACAGTAAGCGTCTGTTTGTCAAATGCTACAACTGGGCAGCCATTCATATCCACGCTTGAGCTTCGACAATTTAATGGCTCTACCTACTATACTGAATTTGAGGATCAGTTTTACCTGAGTGTCTCAGCAAGGATTAATTTTGGTGCAGATTCCGAAGCTCCAGTAAGGTATCCTGATGATCCATTTGACCGGATATGGGAGTCGGACTCTGTGAGAAAAGCAAATTACCTTGTTGATGTTGCTGCTGGTACAGAAAAAATTTCCACTAAAATGCCAATAGATGTAGATAGAGATGAAAGGCCACCTCAAAAAGTTATGCAGACGGCTGTAGTCGGAAGAAATGGTTCATTAACTTACCGGTTAAATTTGGATGGTTTCCCTGGCTTTGGATGGGCTGTCACCTACTTCGCGGAAATTGAAGACTTGGGTCCAACTGATACGAGAAAATTCAGGCTTGTACTTCCCGGCATGCCTGATATCAGCAAAGCTGTAGTCAACATTGAAGAAAATGCTCAAGGAAAATATCGGCTTTATGAGCCTGGTTTTACCAACTTAACCTTCCCTTTTGTATTATCTTTTCGGTTTGGGAAAACATCAGATTCTTCGTTGGGACCTCTGTTAAACGCTATGGAGATTAACAAGTATCTTGAAAAAAGTGATGGTTCTCTAGATGGTAAGCCTAAATTCAAATTGGTTCCAAGTTTAAACTCTCGAGCAGCTGTTGCTAGTGTAATTTCAAAATTTTCATCTTCAGATTGGGATGAAGGTGGTGATCCATGCATGCCAGTTCCTTGGTCATGGTTGCAATGTAACTCTGATCCACGGTCAAGAATAGTTAAAATTTCATTGTCCAAAAAGAATTTGACGGGGAGCATCCCCACAGACCTTGCAAAGTTGAGCGGTTTAGTTGAATTATGGCTTGATGGAAATTCGTTCGTAGGTCCTATACCAGACTTTACTGGATGCGCGGACTTAAAAATCCTCCATCTCGAGAACAACCAGTTGACTGGAGAGTTGCCTTCCTCTTTAGCAAATCTACCAAGTTTACGGGAGCTGTATGTTCAGAATAACATGTTATCTGGAACAGTGCCTTCTGGTCTTCTCAATAAAAACCTAGTCATAGACTACTCTGGAAACATCAATCTTCATGAAGGGGGGAAAAAGAACCACGTTTATATCATTGTGGGTTCAGTAATTGGTGCTCTTGTCCTGCTGTTGGCTACTGTGGTATCTTGCTACTTTTTGCAAAAAGGAAGAAAAAGATATCAAGAACAAGATCTACTTGAAGAATCCTTGCCTGTACAAAGATTTGCCTCTTCAAAGGGTGATGCCCCCAAGGAAACCGCACATTGCTTCAGTGTTAATGAAATTGTAGAAGCAACAAGAGATTTTGAAAGAAAAATTGGGTCTGGAGGTTTTGGTGTTGTATACTACGGGAAATTAAATGACGGAAAAGAAATTGCAGTTAAAGTTTTGACTAATAACTCCTTTCAGGGAAAGCGGGAATTTGCGAACGAGGTGACTCTTCTTTCAAGGATTCATCACAGAAATTTGGTACAATTTCTTGGATATTGCCAAGAAGAAGACAGAAGTATGCTTGTCTATGAGTTCATGCATAATGGAACTCTCAAAGAACATCTTTATGGTAAGCCCGCATGTTATGTTTGCAGAGAACAATGCAGGTTCAGAAGCCAACTAACTTCTTGTTTGTGTACAGGTCCACTAGTACGGGAAAAAACTATCAGTTGGATTAAGCGCCTCGAGATTGCTGAAGATTCTGCAAGAGGGATCGAGTACCTTCATACAGGTTGCATACCAGCAATTATTCATAGAGATCTGAAAAGCAGTAATATTCTCCTTGACAGGCACATGAAAGCAAAGGTTTCAGATTTTGGCCTTTCAAAGCTTGCGGTGGATGGTGTCTCCCACGTGTCCAGCATCGTTCGGGGAACTGTAGGATATTTGGATCCAGAGTATTATATCTCTCAGCAGTTGACAGACAAGAGCGATGTATATAGCTTTGGCGTTATTCTTCTCGAGTTGATATCTGGTCAAGAAGCAATATCTAATGTAAACTTTGGTGTTAATTGCCGCAATATCGTCCAGTGGGCAAAGTTACACATCGAGAGCGGGGACATTCAAGGAATCATCGATCCATCGCTACGCAACGAATACGACATTCAATCGATGTGGAAAATTGCAGAGAAAGCGTTGATGTGTGTCCAGCCACATGGGCACCTGAGGCCATCCATATCTGAAGTGCTGAAGGAGATACAAGATTCACTTTTGATTGAAAGGGAAGCTACTGCAACTAGAGAAGGTAACTCTGATGATATGTCTAGAAACTCAATCCACTCTTTGAATATGGGATCTCTTGATTTATGTGGAAACGAAAACTACGTGTCGTTTGACGAATCCATGGCTCGACCTACTGCAAGGTAG 2874 41.23 METKLLLLLLLFLFHACFAQMPGFVSLDCGGQESFTDDIGLEWVPDTQIRFGEAINISVANETKKQYLTLRHFPADSRKYCYSLNVTSRTRYLLRATFLYGNFDNNNVYPKFDISLGATHWSTIVISDANTIEVRELIFLASTPTVSVCLSNATTGQPFISTLELRQFNGSTYYTEFEDQFYLSVSARINFGADSEAPVRYPDDPFDRIWESDSVRKANYLVDVAAGTEKISTKMPIDVDRDERPPQKVMQTAVVGRNGSLTYRLNLDGFPGFGWAVTYFAEIEDLGPTDTRKFRLVLPGMPDISKAVVNIEENAQGKYRLYEPGFTNLTFPFVLSFRFGKTSDSSLGPLLNAMEINKYLEKSDGSLDGKPKFKLVPSLNSRAAVASVISKFSSSDWDEGGDPCMPVPWSWLQCNSDPRSRIVKISLSKKNLTGSIPTDLAKLSGLVELWLDGNSFVGPIPDFTGCADLKILHLENNQLTGELPSSLANLPSLRELYVQNNMLSGTVPSGLLNKNLVIDYSGNINLHEGGKKNHVYIIVGSVIGALVLLLATVVSCYFLQKGRKRYQEQDLLEESLPVQRFASSKGDAPKETAHCFSVNEIVEATRDFERKIGSGGFGVVYYGKLNDGKEIAVKVLTNNSFQGKREFANEVTLLSRIHHRNLVQFLGYCQEEDRSMLVYEFMHNGTLKEHLYGKPACYVCREQCRFRSQLTSCLCTGPLVREKTISWIKRLEIAEDSARGIEYLHTGCIPAIIHRDLKSSNILLDRHMKAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNVNFGVNCRNIVQWAKLHIESGDIQGIIDPSLRNEYDIQSMWKIAEKALMCVQPHGHLRPSISEVLKEIQDSLLIEREATATREGNSDDMSRNSIHSLNMGSLDLCGNENYVSFDESMARPTAR 957
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 803287 810599 + CmoCh14G001770.1 Cmo14g00177 395443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00177 957 CDD STKc_IRAK 612 903 - -
Cmo14g00177 957 PANTHER OS07G0107800 PROTEIN-RELATED 718 943 - -
Cmo14g00177 957 PANTHER OS07G0107800 PROTEIN-RELATED 11 693 - -
Cmo14g00177 957 Gene3D Transferase(Phosphotransferase) domain 1 682 927 - -
Cmo14g00177 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Cmo14g00177 957 SUPERFAMILY L domain-like 406 513 - -
Cmo14g00177 957 SUPERFAMILY Protein kinase-like (PK-like) 594 902 IPR011009 -
Cmo14g00177 957 Gene3D Phosphorylase Kinase; domain 1 581 681 - -
Cmo14g00177 957 Pfam Protein tyrosine and serine/threonine kinase 608 835 IPR001245 GO:0004672|GO:0006468
Cmo14g00177 957 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Cmo14g00177 957 Gene3D Ribonuclease Inhibitor 380 531 IPR032675 -
Cmo14g00177 957 PANTHER TYROSINE KINASE DOMAIN PROTEIN 718 943 - -
Cmo14g00177 957 PANTHER TYROSINE KINASE DOMAIN PROTEIN 11 693 - -
Cmo14g00177 957 Pfam Leucine rich repeat 463 503 IPR001611 GO:0005515
Cmo14g00177 957 Pfam Malectin-like domain 27 357 IPR024788 -
Cmo14g00177 957 SMART serkin_6 606 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00177 957 ProSiteProfiles Protein kinase domain profile. 606 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01903 Cmo-Chr4:9700720 Cmo14g00177 Cmo-Chr14:803287 0 dispersed
Cmo08g00038 Cmo-Chr8:191423 Cmo14g00177 Cmo-Chr14:803287 4.93E-128 dispersed
Cmo08g00214 Cmo-Chr8:1277155 Cmo14g00177 Cmo-Chr14:803287 2.23E-127 dispersed
Cmo14g00177 Cmo-Chr14:803287 Cmo18g00711 Cmo-Chr18:8942293 0 dispersed
Cmo06g00344 Cmo-Chr6:1670287 Cmo14g00177 Cmo-Chr14:803287 4.75E-32 transposed
Cmo06g00345 Cmo-Chr6:1670653 Cmo14g00177 Cmo-Chr14:803287 3.43E-135 transposed
Cmo14g00177 Cmo-Chr14:803287 Cmo06g00343 Cmo-Chr6:1665485 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74823 PF12819 Malectin_like 6.80E-78 CL0202 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00177 - - csv:101212456 1721.44