Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00216 ATGGCGATCGCGATGGCCAAATCTTTCGATCCCCAATCCCAGATTTACACTTCCCCACGTCCCCCAATCCACTTTCCAACCGACCCCACTATCTCCATTGTTTCGTTTGTCTTCCGAAACTCCTCCTCTTTCCTTCATAGCCTCGCTCTCGCCGACGCTGATTCCGGCGAATCCCTAACTTTCCGTCAGCTTCAAATCCAAGTCTCCAAGTTGGCCCATGCGTTTATCCACCTCGGGATTCGAAAAGGCGATGTGGTTCTCATATTTGCGCCTAATTCCATTCATTTCCCTGTTTGTTTCTTCGCCATTGTTGCCATTGGAGCCATCGCCACCACTTGTAACCCTGCTTACACCTTCGTGGAACTATCAAAGCAAGTCGCGAACTGCAACCCCAAGCTCGTAATCACCGTTCCAGAACTCTGGGACGTAATCGGTAAACTCAACTTGCCTTCTATAATCTTGGGTTCTGAAATTTCTTCGAAATCCTCCCGCCCCAATATCTGGGTTTACTCCGATTTGATCAAAAACTCCGGCGACGTGTCCGATTTTCCTGTGAGTGAAGTGGGTCAGAGCGATGTGGCGGCACTTTTGTATTCATCTGGGACGACAGGGATTAGCAAGGGAGTGATTCTGACTCATAGAAACTTCATAGCGACGTCGTTAATGGTGACCCATGATCAGGACCTTCTTGGTGATCCTAGAAACGTGTTCTTATGCTTTCTCCCAATGTTCCATGTATTTGGTCTCTCTGTAATTCTTTACTCGCAGCTTCAAAGAGGAAACACCGTCGTTTCAATGGCGAAGTTTGAGCTGGAAAAGGCTTTGGGAGTGGTGATGAAGTATAGAATCACTCATCTTTATCTTGTTCCGCCTGTAATTATAGCCATGGCGAAGCAAAGTGTGGTGAAGAAGTATGACTTGTCGTCGTTGAAGCAGATTTTATCTGGGGCGGCGCCTCTTGGGAAGGATGTGATGGAAGAATGTTCTAAGGTTTTACCTCAGACCAAGATCACGCAGGGGTATGGTATGACAGAAACTTGTGGAGTCATTTCAATGGAGAATTTGGGGGTCGAATCTAGACTATCCGGGTCAACTGGACTCCTTGTTTCAGGAATTGAGGCCCAAATTTTGAGTACAGAAACGCAGAAGCGTCTCCCACCCGGTGAAACAGGGGAGATATGCGTGCGAGGACCAAATATGATGAAAGGATATTTCAACAATCAGAAAGCCACCAGCCAAACCATAGACGATCAAGGATGGGTTCATACTGGAGATATCGGATACTTTAATGAAGAAGGAGAATTGTTTGTTGTGGACAGAATCAAAGAACTCATCAAGTGTTATGGTTTTCAGGTTGCACCAGCGGAGCTTGAAGCACTGCTACTTTCCCATCCTCAAGTAATAGATGCCATTGTGATCCCATATCCTGATGATAAAGCCGGTGAGGTCCCTATTGCATTTGTTGTTCGTTCACCTAACAGCTCAATAAATGAAGAAGATGTTAAAAGTTTTATCGCGGGTCAGGTTGCACCATTCAAGAGATTAAAAATAGTAACCTTCACGAGTAGCGTTCCGAAGTCGGCTTCGGGAAAGCTTCTGAGAAGGGAGCTCATAGCACAAGTCCGTGCCAAGATGTAG 1638 46.28 MAIAMAKSFDPQSQIYTSPRPPIHFPTDPTISIVSFVFRNSSSFLHSLALADADSGESLTFRQLQIQVSKLAHAFIHLGIRKGDVVLIFAPNSIHFPVCFFAIVAIGAIATTCNPAYTFVELSKQVANCNPKLVITVPELWDVIGKLNLPSIILGSEISSKSSRPNIWVYSDLIKNSGDVSDFPVSEVGQSDVAALLYSSGTTGISKGVILTHRNFIATSLMVTHDQDLLGDPRNVFLCFLPMFHVFGLSVILYSQLQRGNTVVSMAKFELEKALGVVMKYRITHLYLVPPVIIAMAKQSVVKKYDLSSLKQILSGAAPLGKDVMEECSKVLPQTKITQGYGMTETCGVISMENLGVESRLSGSTGLLVSGIEAQILSTETQKRLPPGETGEICVRGPNMMKGYFNNQKATSQTIDDQGWVHTGDIGYFNEEGELFVVDRIKELIKCYGFQVAPAELEALLLSHPQVIDAIVIPYPDDKAGEVPIAFVVRSPNSSINEEDVKSFIAGQVAPFKRLKIVTFTSSVPKSASGKLLRRELIAQVRAKM 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 997716 1001444 - CmoCh14G002160.1 Cmo14g00216 395482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00216 545 Pfam AMP-binding enzyme C-terminal domain 456 531 IPR025110 -
Cmo14g00216 545 SUPERFAMILY Acetyl-CoA synthetase-like 16 543 - -
Cmo14g00216 545 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 544 - -
Cmo14g00216 545 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 8 544 - -
Cmo14g00216 545 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Cmo14g00216 545 Gene3D - 14 442 IPR042099 -
Cmo14g00216 545 CDD 4CL 25 537 - -
Cmo14g00216 545 Pfam AMP-binding enzyme 48 447 IPR000873 -
Cmo14g00216 545 Gene3D - 443 544 IPR045851 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00547 Cmo-Chr1:2706399 Cmo14g00216 Cmo-Chr14:997716 0 dispersed
Cmo11g01552 Cmo-Chr11:11174188 Cmo14g00216 Cmo-Chr14:997716 5.90E-37 dispersed
Cmo14g00216 Cmo-Chr14:997716 Cmo19g00221 Cmo-Chr19:1483825 6.64E-137 dispersed
Cmo14g00797 Cmo-Chr14:4069905 Cmo14g00216 Cmo-Chr14:997716 3.96E-34 dispersed
Cmo20g00062 Cmo-Chr20:344468 Cmo14g00216 Cmo-Chr14:997716 2.02E-20 dispersed
Cmo14g00216 Cmo-Chr14:997716 Cmo09g00069 Cmo-Chr9:306661 5.26E-151 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00216 K01904 - csv:101204417 953.355