Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00225 ATGCCGTTCCAGAGGATAGTAATCGCTGTCGGCCGGCCGGAGGAGGCCACCCATCCCGCCGCCCTGAAGGCCGCCTTGGCCGAGTTCATTTCCACTCTTATCTTCGTATTCGCCGGCCAAGGTTCGGGTCTTGCTTTCTCTAAACTCACCCAGAATTCTCCCACCTCCCCTGCTGCCCTCATCATCGCTTCCTTAGCTCATGGCTTTGCCCTTTTCGTCGGAGTCTCCACCGGCGCCAACATCTCCGGCGGCCACCTCAACCCCGCCGTCACTTTCGGAGCCTTAGTAGGCGGAAACATCACCCTCCTCCGCGGCATTCTCTACTGGATAGCCCAGCTCCTCGGCGCTCTTGTCGCTAACTTGTTGCTTAAATTCGTCATCACGGACGTAGTAATTTCTGGATTCTCACTGTCAGCAGGGGTGGGAGTGTGGGAGGCGCTCGTATTCGAGATCGTAATGACATTCGGATTAGTGTACACAGTTTACGCCACCGCCATCGACCCGAAGAAGGGTGAGTTGGGAGTGATAGCACCCATCGCCATCGGGTTCATAGTGGCCGCCAACATTCTGGTGGGCGGCCCATTCACCGGCGCTTCCATGAACCCGGCCGTGGCCTTCGGACCCGCCGTCGTGGCTGGGTCTTGGGCCCAGCACTGGATCTACTGGGCCGGCCCACTGATTGGCGGCGGCTTGGCCGGCATTGTGTATGAGCTGTTCTTCATTGGGTTCACCCATGAGCCCCTCCCCGCCGCGGAGTACTAA 762 59.19 MPFQRIVIAVGRPEEATHPAALKAALAEFISTLIFVFAGQGSGLAFSKLTQNSPTSPAALIIASLAHGFALFVGVSTGANISGGHLNPAVTFGALVGGNITLLRGILYWIAQLLGALVANLLLKFVITDVVISGFSLSAGVGVWEALVFEIVMTFGLVYTVYATAIDPKKGELGVIAPIAIGFIVAANILVGGPFTGASMNPAVAFGPAVVAGSWAQHWIYWAGPLIGGGLAGIVYELFFIGFTHEPLPAAEY 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1039713 1041149 - CmoCh14G002250.1 Cmo14g00225 395491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 23 42 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 67 91 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 104 123 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 149 167 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 182 204 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PRINTS Major intrinsic protein family signature 219 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 CDD MIP 23 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PANTHER AQUAPORIN TIP1-1 7 252 - -
Cmo14g00225 253 Pfam Major intrinsic protein 16 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 TIGRFAM MIP: MIP family channel proteins 27 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00225 253 PANTHER AQUAPORIN-8 7 252 IPR034294 -
Cmo14g00225 253 ProSitePatterns MIP family signature. 85 93 IPR022357 -
Cmo14g00225 253 Gene3D Glycerol uptake facilitator protein. 6 248 IPR023271 -
Cmo14g00225 253 SUPERFAMILY Aquaporin-like 15 248 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01198 Cmo14g00225 CCT
Cmo07g00921 Cmo14g00225 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00682 Cmo-Chr8:4365247 Cmo14g00225 Cmo-Chr14:1039713 3.39E-95 dispersed
Cmo12g00210 Cmo-Chr12:1376613 Cmo14g00225 Cmo-Chr14:1039713 2.57E-79 dispersed
Cmo13g00982 Cmo-Chr13:8400229 Cmo14g00225 Cmo-Chr14:1039713 9.47E-92 dispersed
Cmo14g00225 Cmo-Chr14:1039713 Cmo18g00087 Cmo-Chr18:583155 2.55E-83 dispersed
Cmo20g00773 Cmo-Chr20:3870348 Cmo14g00225 Cmo-Chr14:1039713 4.92E-21 dispersed
Cmo14g00225 Cmo-Chr14:1039713 Cmo03g01198 Cmo-Chr3:9354988 9.37E-128 wgd
Cmo14g00225 Cmo-Chr14:1039713 Cmo07g00921 Cmo-Chr7:4427126 2.65E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00225 K09873 - csv:101222386 423.32