Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00231 ATGGCGAGCCAAGCAGTCCTTGTTGCAACGTTCTTGTTCTTCGTCCTCCGTTTTGGGGCGGAAGCTGCTACGATAACGGTGAGGAACAATTGTCCGAGAACCATATGGCCAGCAACATTAACAAGCGGTCCAGGACAACCTCAACTATCAACAACTGGATTCGAATTAGCTCCCGGAGCGTCAAGGTCGTTTAACGTCCCAGCGCCATGGACCGGTCGAGTATGGGCAAGAACCCGATGCTCCAACAACGGTGGACGTTTCACTTGCTTGACAGGAGATTGCGGTCGTGGGCTCTCATGCAATGGCGCAGGAGGAGTCCCACCAGCGACGTTAGCTGAATTCACGGTCGCCCCGAACGGCGGGCAAGATTTCTATGATGTCAGCCTCGTCGATGGCTTCAACATTCCAACCACCATCGTGGCCCAAGGCGGGACAGGGCCATGCAGATCCTCCAACTGCCGTAATGACGTGAATAGGGTATGTCCAGGGGAATTGCAAGTGAGATCGGGCAACGAAGTGATTGGTTGCAAGAGTGCTTGCTTTGCATTCAACCAGCCTCAGTATTGCTGCACCGGAGCGTTCAATGACCCTAACAAGTGCAGGCCAACAAACTACTCAATGATTTTCGAGAACCAATGCCCGGATGCTTATAGCTACGCATATGATGATAAGAACAGCACTTTCACTTGCAACAACAGGCCAAATTATGTCATCACATTCTGCGGTTGA 729 51.85 MASQAVLVATFLFFVLRFGAEAATITVRNNCPRTIWPATLTSGPGQPQLSTTGFELAPGASRSFNVPAPWTGRVWARTRCSNNGGRFTCLTGDCGRGLSCNGAGGVPPATLAEFTVAPNGGQDFYDVSLVDGFNIPTTIVAQGGTGPCRSSNCRNDVNRVCPGELQVRSGNEVIGCKSACFAFNQPQYCCTGAFNDPNKCRPTNYSMIFENQCPDAYSYAYDDKNSTFTCNNRPNYVITFCG 242
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1063909 1064890 + CmoCh14G002310.1 Cmo14g00231 395497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00231 242 ProSitePatterns Thaumatin family signature. 85 100 IPR017949 -
Cmo14g00231 242 Pfam Thaumatin family 29 241 IPR001938 -
Cmo14g00231 242 PIRSF PR5 1 242 IPR001938 -
Cmo14g00231 242 PANTHER OS03G0233200 PROTEIN 6 241 IPR001938 -
Cmo14g00231 242 PANTHER PRU PROTEIN, PUTATIVE-RELATED 6 241 - -
Cmo14g00231 242 CDD TLP-PA 24 241 - -
Cmo14g00231 242 PRINTS Pathogenesis-related protein signature 24 36 IPR001938 -
Cmo14g00231 242 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Cmo14g00231 242 PRINTS Pathogenesis-related protein signature 85 114 IPR001938 -
Cmo14g00231 242 PRINTS Pathogenesis-related protein signature 123 139 IPR001938 -
Cmo14g00231 242 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Cmo14g00231 242 SUPERFAMILY Osmotin, thaumatin-like protein 23 241 IPR037176 -
Cmo14g00231 242 SMART tha2 25 242 IPR001938 -
Cmo14g00231 242 ProSiteProfiles Thaumatin family profile. 22 242 IPR001938 -
Cmo14g00231 242 Gene3D Thaumatin 23 241 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo03g01193 Cmo14g00231 CCT
Cmo07g00919 Cmo14g00231 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00231 Cmo-Chr14:1063909 Cmo19g00289 Cmo-Chr19:2155847 2.45E-107 dispersed
Cmo14g00231 Cmo-Chr14:1063909 Cmo07g00919 Cmo-Chr7:4410234 8.32E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00231 - - csv:101203304 444.121