Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00253 ATGACCCTCCAACTCGGGTCCATGAAAACAGTGGTCGTCTCATCGAGCACCATAGCACGAGAGATGTTCAAAAACCACGACGCGCCGCTGTCGGGGCGTATGATTTACGAGGCAATGAAGGGGGACCATGGCACAGAAGGTTCCCTAATCACCTCCCAATACGGATCCCACTGGCGAATGCTGAGGCGATTAGCAACGAGCGAATTCTTCGTCACTCGCCGGCTCGACGCCATGCAACACGTCCGCCGACGTTGCGTCGATGCCATGATCCAATATGTGGAAGATGAAATAAAGGGAAGCGCGTATTGGTACGCGCCGCCGATGGACGTGGGGAAATTCTTCTTTATAATGAGCTTTAATTTAATCGGGAACCTAATATTTTCGAAAGATCTAGTGGGGCCCAATTCGAAGAGGGGGAAGGAATTCTATTACCACACGAGAAGGGTGATGGAGACGGCCGGAACGCCGAATGTGGCGGACTTTCTACGGGTGTTCCGGTGGTTCGACCCGCAGGGGATTAGGAGAACGACGCAGTTTCATGTGAAGGAGGCGTTTGAAATCGCCGGCGAGTTCATAAAAGAAAGATCCATGGAGAAAGAGAAAAAAGAAGAAAGAAAAAAGGATTATTTGGATGTGCTTTTGGAGTTCCGTGGCGATGGCGTTGTGGAGCCCTCCCGTTTCTCTTCTTGGATCATCAACGTTATCGTCCTAATGTTCACGGCAGGGACGGACACCACCACTAGTTCACTAGAATGGGCAATGGCGGAGCTACTCCGCAACCCGGCAGCGATGCAAAAACTTCAGGCGGAGCTACGATCCACCATACCGCCAGATGGCAAACTCGAAGAAACCCATCTGCAAAACCTCCCATATCTTGATGCTGTCGTCAAAGAAACCCTCCGCCTCCACCCACCGCTGCCGTTTCTTTTCCCGAGAATGGCAATGAAGCCCTGTAAAATCCTCGGCTACTGGATTCCGGCGGAAACCCAAGTCTTGGTCAACGTTTGGGCCATTGGCCGTGACCCCAAAAACTGGAAAGACGCCTTGGTTTTCTCGCCGGAGAGATTCTTGGAGCCCACCGGCAGCAAGGATTTTAAAGGTCAACACTTTGACTTCCTTCCGTTTGGCTCTGGCCGCCGCATGTGCCCGGCGGTGCCGCTGGCATCAAGGGTTCTTCCAATGGCTCTGGGGTCGTTGATTCTGCGGTTTGATTGGGCTCTGCCGGACGGACTTTTGCCGGAAGAGATGGACATGTCGGAGCAAATGGGAATTACTCTGAAAAAGAAAGTTCCTTTGAAGGCCATTCCGATTCCTCATAAACGTCGTTTCGTGTAA 1335 52.06 MTLQLGSMKTVVVSSSTIAREMFKNHDAPLSGRMIYEAMKGDHGTEGSLITSQYGSHWRMLRRLATSEFFVTRRLDAMQHVRRRCVDAMIQYVEDEIKGSAYWYAPPMDVGKFFFIMSFNLIGNLIFSKDLVGPNSKRGKEFYYHTRRVMETAGTPNVADFLRVFRWFDPQGIRRTTQFHVKEAFEIAGEFIKERSMEKEKKEERKKDYLDVLLEFRGDGVVEPSRFSSWIINVIVLMFTAGTDTTTSSLEWAMAELLRNPAAMQKLQAELRSTIPPDGKLEETHLQNLPYLDAVVKETLRLHPPLPFLFPRMAMKPCKILGYWIPAETQVLVNVWAIGRDPKNWKDALVFSPERFLEPTGSKDFKGQHFDFLPFGSGRRMCPAVPLASRVLPMALGSLILRFDWALPDGLLPEEMDMSEQMGITLKKKVPLKAIPIPHKRRFV 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1163156 1165652 + CmoCh14G002530.1 Cmo14g00253 395519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00253 444 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Cmo14g00253 444 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 230 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 250 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 334 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 293 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS P450 superfamily signature 241 258 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PRINTS P450 superfamily signature 294 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 PANTHER CYTOCHROME P450 FAMILY 1 1 440 - -
Cmo14g00253 444 PANTHER CYTOCHROME P450 76A1-LIKE 1 440 - -
Cmo14g00253 444 Gene3D Cytochrome P450 1 435 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 Pfam Cytochrome P450 1 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g00253 444 SUPERFAMILY Cytochrome P450 2 438 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00253 Cmo-Chr14:1163156 Cmo19g00145 Cmo-Chr19:804103 7.44E-105 dispersed
Cmo14g00253 Cmo-Chr14:1163156 Cmo02g01753 Cmo-Chr2:10032822 2.51E-89 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00253 - - csv:101222700 718.768