Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00266 ATGACTTCAGTCGTTACGAATAATCTTATTGGGCCTAATTTAAGGAATATTACGAAAACGCCACTACGCATAAAAGTTCTGTATGGTTCCCAGCTTCTCTCTCCGACAGTCGAATTTCTGAAAGAGACATACTCACCGGAAAGGTGGAAAATCGAAGGGAGGGGAAATCTTCATCGCTTCGATGGTGGATTTTCGGGACCGAACGGATTCCAGTTGATCGGAATTCTCAGAATCTCGATGGAAATGCCCGGCAGGAGATTGAACTACACGCTTCTCAGTCAAATTCCAGACGACCAGTACAGTGGAGGCGTTGCTGTGGCTGGAGCCGGAGCTTCGACATCGTTGATAGAAACATCATCAGGAGAGGGGAAGAACGACAGGAGAAAGTTGGAAAGAGGATTGGATTGGGAAGCGGGTGGTGATCACAGGTCGGGCCAGCAGCAGCAGGTTAATTGGATCGGTAATATGTACTCGACGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGTTCGATATCCGGGGAGTACTATGCACCGACACCATCGACTACAGTGGCTAACGAGACGGATGCGTTTGGGTGTACGCACGATGATGTGCTTAGGATTGGAGGCGATTCGAGACCACAGACAGCCGAGATGGCCGCTGGGACTGGAGGATCTTCTAGTAAGAGCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGCTGGCATTGGCGCTTCGGCTTTCATCTGTGGCGACTTGTGCTGAGGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGTTTTAAGGAGGTCGATTAGCTCTGCTGAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGCCTATCATACTTTGACAAGGTTCCTGATGGGTTTTATTTAATCCGTGGAATGGATCCATATGTATGGACTGTATGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTAGCACTGATTCTTCAATTGAAGTTGTTCTGATTGATCGGCGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAAGCGTTTCTTGCACCTCTATAACCACAGAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGAGTCGATATGGAGGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTGGTTGTTCCTCTTGGTGGACTCTCTGTAGGACTCTGCCGGCATCGTGCACTTCTTTTTAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGTGTAGCCAAGGGCTGTAAATATTGCTCACGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTGATTGGAAATCCTGGTTGCTTGTATGAGCCTGATTCTTTGCTCAATGGCCCATCCTCCATTTTGATCTCCTCGCCGTTGCGACTTCCACGACTAAAGCCAGTAGAGCCGGCTATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAATTGCTTAATGTTGTTTTCGATGAAGCTTCCTCATGTAATTACTCAGCCACAGGTGTATTTGTGGGGGGAAAACTATTCAAATCTATATCTGGTATTAGTAAACCTCTAATAGCACTTACAAAAGGCTGCAGTAAGCATGCAATATTGCTGAATCGCATAATTTTTGTTATGGCTTGCATTTACGTTTTCTCAAAACTTCTATCACACTCAATCTTGCAAGCTTTCCCTTTTTTATTCGTCACCATCACAGAAAATACAGTGGACGGAGAAGATAGCGCACTCCCCTTGTATCTAAAGCAGTTTGATAGAAAGTTCACTAACAGAAGCAACCAAATGCTTGTCCCTGGTGAAAATGATGAAAAATCCATTTTATTGCATGCAAAAACTTCGCAGCCTAATTCCCAAGACAGAGATTTCCAACTACTTAAACTGCGTGATAATTCTCATAATGCTATACAACCAACTATCCTCGTCGAGGATTCAATCCCACTGAAGTACGTTCCACATATTAGCCGTGGAAGTGCGCAGTCATATTTGGATATGTCCCACCCAAGGATGGATTCTACTATGGACGTAAGGTTTCAACAGGGAGGTCAGCTAATACCAGGCACACGGAGTAACACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGAATGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTCATTCTGAGCATATTGTTGGTGTAATTTCAGGTTCCTTCGGAACTGTGCATCGTGCTGATTGGCATGGATCGGGAGCATTTTTGTATCTTGCAGTTCCTTTGGATGGGAATGGAAACCCTGTCTTCTATATGATGTGTTCACGCCATATTTCTAAGATTTTATCATGGGCATGTCAGGAAGTTGCTGTGAAGATCCTAACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCCGTGACCAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGTGTCAAAGACATTGATGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGATCCTCCAATTGTTCATCGCGATCTAAAATCACCGAATCTTTTAGTTGACAGGAAGTATACAGTAAAGGTAGATAAGTTTGTAACTTTCAGCTTAAAAATATTTCTCCTAGGGGACACTATTTTCCCGCTTTTTGGTCCTCTATCTCTTGTTAAGGTGTTACTTTGCTGGCATGAGCCCCCGCTACTCTTCCTAGTGCGTCATCTACATTTTACCACTGTTGATAACCTTGCAAGTCCTAGGTACATGAGTTTAACTGAAACGGTTCAGCAGAAATTTTTTAAACATAAGAACATGGAAATAAATGATAATGAATGTTCCAAAATCTGTAAGCAACAAGTTCTATCTTTTACGCTTCAAGGGAGGGAGTGGGGAACATCAATTTACAACATTGAAAACAAAATAAATTTCCATATCTGA 3150 43.59 MTSVVTNNLIGPNLRNITKTPLRIKVLYGSQLLSPTVEFLKETYSPERWKIEGRGNLHRFDGGFSGPNGFQLIGILRISMEMPGRRLNYTLLSQIPDDQYSGGVAVAGAGASTSLIETSSGEGKNDRRKLERGLDWEAGGDHRSGQQQQVNWIGNMYSTFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDAFGCTHDDVLRIGGDSRPQTAEMAAGTGGSSSKSWAQQTEESYQLQLALALRLSSVATCAEDPNFLNPFQDDSVLRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIRGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDRRTDPNLKDLQNWVQSVSCTSITTEEVVDQLAKLVCRSLGGSVSGEDVLESIWRECSDNLKETLGSVVVPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSRHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRLPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSCNYSATGVFVGGKLFKSISGISKPLIALTKGCSKHAILLNRIIFVMACIYVFSKLLSHSILQAFPFLFVTITENTVDGEDSALPLYLKQFDRKFTNRSNQMLVPGENDEKSILLHAKTSQPNSQDRDFQLLKLRDNSHNAIQPTILVEDSIPLKYVPHISRGSAQSYLDMSHPRMDSTMDVRFQQGGQLIPGTRSNTLPLGAEDLDIPWNDLVLKERIGAGHSEHIVGVISGSFGTVHRADWHGSGAFLYLAVPLDGNGNPVFYMMCSRHISKILSWACQEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDRKYTVKVDKFVTFSLKIFLLGDTIFPLFGPLSLVKVLLCWHEPPLLFLVRHLHFTTVDNLASPRYMSLTETVQQKFFKHKNMEINDNECSKICKQQVLSFTLQGREWGTSIYNIENKINFHI 1049
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1195739 1203583 + CmoCh14G002660.1 Cmo14g00266 395532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00266 1049 Gene3D Transferase(Phosphotransferase) domain 1 872 995 - -
Cmo14g00266 1049 ProSiteProfiles Protein kinase domain profile. 759 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00266 1049 SMART serkin_6 760 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00266 1049 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 218 937 - -
Cmo14g00266 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 914 926 IPR008271 GO:0004672|GO:0006468
Cmo14g00266 1049 SUPERFAMILY Protein kinase-like (PK-like) 767 934 IPR011009 -
Cmo14g00266 1049 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 218 937 - -
Cmo14g00266 1049 Pfam Protein tyrosine and serine/threonine kinase 814 937 IPR001245 GO:0004672|GO:0006468
Cmo14g00266 1049 Pfam Ethylene-responsive protein kinase Le-CTR1 276 480 - -
Cmo14g00266 1049 Gene3D Phosphorylase Kinase; domain 1 741 871 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01170 Cmo-Chr3:9188594 Cmo14g00266 Cmo-Chr14:1195739 0 dispersed
Cmo14g00266 Cmo-Chr14:1195739 Cmo09g00582 Cmo-Chr9:2850373 1.46E-52 dispersed
Cmo14g00266 Cmo-Chr14:1195739 Cmo06g00442 Cmo-Chr6:2118798 1.82E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74826 PF14381 EDR1 2.60E-77 CL0125 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00266 K14510 - csv:101208452 801.971