Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g00266 | ATGACTTCAGTCGTTACGAATAATCTTATTGGGCCTAATTTAAGGAATATTACGAAAACGCCACTACGCATAAAAGTTCTGTATGGTTCCCAGCTTCTCTCTCCGACAGTCGAATTTCTGAAAGAGACATACTCACCGGAAAGGTGGAAAATCGAAGGGAGGGGAAATCTTCATCGCTTCGATGGTGGATTTTCGGGACCGAACGGATTCCAGTTGATCGGAATTCTCAGAATCTCGATGGAAATGCCCGGCAGGAGATTGAACTACACGCTTCTCAGTCAAATTCCAGACGACCAGTACAGTGGAGGCGTTGCTGTGGCTGGAGCCGGAGCTTCGACATCGTTGATAGAAACATCATCAGGAGAGGGGAAGAACGACAGGAGAAAGTTGGAAAGAGGATTGGATTGGGAAGCGGGTGGTGATCACAGGTCGGGCCAGCAGCAGCAGGTTAATTGGATCGGTAATATGTACTCGACGTTTGGTTTGCAGAGGCAGTCCAGTGGAAGCAGCTTTGGAGAGAGTTCGATATCCGGGGAGTACTATGCACCGACACCATCGACTACAGTGGCTAACGAGACGGATGCGTTTGGGTGTACGCACGATGATGTGCTTAGGATTGGAGGCGATTCGAGACCACAGACAGCCGAGATGGCCGCTGGGACTGGAGGATCTTCTAGTAAGAGCTGGGCGCAACAGACGGAGGAGAGTTATCAACTGCAGCTGGCATTGGCGCTTCGGCTTTCATCTGTGGCGACTTGTGCTGAGGATCCTAATTTCTTAAATCCATTTCAGGATGATTCAGTTTTAAGGAGGTCGATTAGCTCTGCTGAGGCTGTGTCACATCGATTTTGGGTGAATGGCTGCCTATCATACTTTGACAAGGTTCCTGATGGGTTTTATTTAATCCGTGGAATGGATCCATATGTATGGACTGTATGCACCAGCCTGCCTGATAATGATCGCATGCCATCAATTGAATCTCTAAAGTCTGTTGATCCTAGCACTGATTCTTCAATTGAAGTTGTTCTGATTGATCGGCGCACTGATCCCAACTTAAAAGACCTCCAAAATTGGGTCCAAAGCGTTTCTTGCACCTCTATAACCACAGAAGAGGTTGTAGACCAGCTTGCAAAACTTGTCTGTAGGAGTTTGGGTGGCTCAGTTTCTGGAGAAGATGTGTTGGAGTCGATATGGAGGGAGTGCAGTGATAACTTGAAGGAGACCTTAGGCTCAGTGGTTGTTCCTCTTGGTGGACTCTCTGTAGGACTCTGCCGGCATCGTGCACTTCTTTTTAAAGTGTTAGCTGACACAATTGATTTACCCTGTCGTGTAGCCAAGGGCTGTAAATATTGCTCACGCCATGATTCTTCTTCTTGTCTTGTTCAGTTTGGGCTTGACAAGGAGTATCTGGTTGACTTGATTGGAAATCCTGGTTGCTTGTATGAGCCTGATTCTTTGCTCAATGGCCCATCCTCCATTTTGATCTCCTCGCCGTTGCGACTTCCACGACTAAAGCCAGTAGAGCCGGCTATTGATTTCAGGTCACTGGCTAAACAGTACTTTTCAGATTGCCAATTGCTTAATGTTGTTTTCGATGAAGCTTCCTCATGTAATTACTCAGCCACAGGTGTATTTGTGGGGGGAAAACTATTCAAATCTATATCTGGTATTAGTAAACCTCTAATAGCACTTACAAAAGGCTGCAGTAAGCATGCAATATTGCTGAATCGCATAATTTTTGTTATGGCTTGCATTTACGTTTTCTCAAAACTTCTATCACACTCAATCTTGCAAGCTTTCCCTTTTTTATTCGTCACCATCACAGAAAATACAGTGGACGGAGAAGATAGCGCACTCCCCTTGTATCTAAAGCAGTTTGATAGAAAGTTCACTAACAGAAGCAACCAAATGCTTGTCCCTGGTGAAAATGATGAAAAATCCATTTTATTGCATGCAAAAACTTCGCAGCCTAATTCCCAAGACAGAGATTTCCAACTACTTAAACTGCGTGATAATTCTCATAATGCTATACAACCAACTATCCTCGTCGAGGATTCAATCCCACTGAAGTACGTTCCACATATTAGCCGTGGAAGTGCGCAGTCATATTTGGATATGTCCCACCCAAGGATGGATTCTACTATGGACGTAAGGTTTCAACAGGGAGGTCAGCTAATACCAGGCACACGGAGTAACACACTTCCCCTTGGTGCAGAGGATTTGGACATTCCATGGAATGATCTTGTTTTAAAAGAAAGAATTGGAGCAGGTCATTCTGAGCATATTGTTGGTGTAATTTCAGGTTCCTTCGGAACTGTGCATCGTGCTGATTGGCATGGATCGGGAGCATTTTTGTATCTTGCAGTTCCTTTGGATGGGAATGGAAACCCTGTCTTCTATATGATGTGTTCACGCCATATTTCTAAGATTTTATCATGGGCATGTCAGGAAGTTGCTGTGAAGATCCTAACAGAACAAGACTTCCATCCTGAACGTGTTAATGAGTTTCTGAGAGAGGTTGCTATCATGAAATCCTTACGACATCCTAATATTGTACTGTTTATGGGTGCCGTGACCAAGCCACCAAACCTGTCCATTGTCACTGAATATCTATCGAGAGGTAGCTTGTATAGGCTTTTGCATAAGTCAGGTGTCAAAGACATTGATGAAACACGTCGGATAAATATGGCTTTTGATGTGGCAAAGGGAATGAACTATCTCCATAGACGTGATCCTCCAATTGTTCATCGCGATCTAAAATCACCGAATCTTTTAGTTGACAGGAAGTATACAGTAAAGGTAGATAAGTTTGTAACTTTCAGCTTAAAAATATTTCTCCTAGGGGACACTATTTTCCCGCTTTTTGGTCCTCTATCTCTTGTTAAGGTGTTACTTTGCTGGCATGAGCCCCCGCTACTCTTCCTAGTGCGTCATCTACATTTTACCACTGTTGATAACCTTGCAAGTCCTAGGTACATGAGTTTAACTGAAACGGTTCAGCAGAAATTTTTTAAACATAAGAACATGGAAATAAATGATAATGAATGTTCCAAAATCTGTAAGCAACAAGTTCTATCTTTTACGCTTCAAGGGAGGGAGTGGGGAACATCAATTTACAACATTGAAAACAAAATAAATTTCCATATCTGA | 3150 | 43.59 | MTSVVTNNLIGPNLRNITKTPLRIKVLYGSQLLSPTVEFLKETYSPERWKIEGRGNLHRFDGGFSGPNGFQLIGILRISMEMPGRRLNYTLLSQIPDDQYSGGVAVAGAGASTSLIETSSGEGKNDRRKLERGLDWEAGGDHRSGQQQQVNWIGNMYSTFGLQRQSSGSSFGESSISGEYYAPTPSTTVANETDAFGCTHDDVLRIGGDSRPQTAEMAAGTGGSSSKSWAQQTEESYQLQLALALRLSSVATCAEDPNFLNPFQDDSVLRRSISSAEAVSHRFWVNGCLSYFDKVPDGFYLIRGMDPYVWTVCTSLPDNDRMPSIESLKSVDPSTDSSIEVVLIDRRTDPNLKDLQNWVQSVSCTSITTEEVVDQLAKLVCRSLGGSVSGEDVLESIWRECSDNLKETLGSVVVPLGGLSVGLCRHRALLFKVLADTIDLPCRVAKGCKYCSRHDSSSCLVQFGLDKEYLVDLIGNPGCLYEPDSLLNGPSSILISSPLRLPRLKPVEPAIDFRSLAKQYFSDCQLLNVVFDEASSCNYSATGVFVGGKLFKSISGISKPLIALTKGCSKHAILLNRIIFVMACIYVFSKLLSHSILQAFPFLFVTITENTVDGEDSALPLYLKQFDRKFTNRSNQMLVPGENDEKSILLHAKTSQPNSQDRDFQLLKLRDNSHNAIQPTILVEDSIPLKYVPHISRGSAQSYLDMSHPRMDSTMDVRFQQGGQLIPGTRSNTLPLGAEDLDIPWNDLVLKERIGAGHSEHIVGVISGSFGTVHRADWHGSGAFLYLAVPLDGNGNPVFYMMCSRHISKILSWACQEVAVKILTEQDFHPERVNEFLREVAIMKSLRHPNIVLFMGAVTKPPNLSIVTEYLSRGSLYRLLHKSGVKDIDETRRINMAFDVAKGMNYLHRRDPPIVHRDLKSPNLLVDRKYTVKVDKFVTFSLKIFLLGDTIFPLFGPLSLVKVLLCWHEPPLLFLVRHLHFTTVDNLASPRYMSLTETVQQKFFKHKNMEINDNECSKICKQQVLSFTLQGREWGTSIYNIENKINFHI | 1049 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1195739 | 1203583 | + | CmoCh14G002660.1 | Cmo14g00266 | 395532 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g00266 | 1049 | Gene3D | Transferase(Phosphotransferase) domain 1 | 872 | 995 | - | - | |
Cmo14g00266 | 1049 | ProSiteProfiles | Protein kinase domain profile. | 759 | 1049 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g00266 | 1049 | SMART | serkin_6 | 760 | 1004 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g00266 | 1049 | PANTHER | MAP KINASE KINASE KINASE-LIKE PROTEIN | 218 | 937 | - | - | |
Cmo14g00266 | 1049 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 914 | 926 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo14g00266 | 1049 | SUPERFAMILY | Protein kinase-like (PK-like) | 767 | 934 | IPR011009 | - | |
Cmo14g00266 | 1049 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 218 | 937 | - | - | |
Cmo14g00266 | 1049 | Pfam | Protein tyrosine and serine/threonine kinase | 814 | 937 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g00266 | 1049 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 276 | 480 | - | - | |
Cmo14g00266 | 1049 | Gene3D | Phosphorylase Kinase; domain 1 | 741 | 871 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo03g01170 | Cmo-Chr3:9188594 | Cmo14g00266 | Cmo-Chr14:1195739 | 0 | dispersed | |
Cmo14g00266 | Cmo-Chr14:1195739 | Cmo09g00582 | Cmo-Chr9:2850373 | 1.46E-52 | dispersed | |
Cmo14g00266 | Cmo-Chr14:1195739 | Cmo06g00442 | Cmo-Chr6:2118798 | 1.82E-139 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74826 | PF14381 | EDR1 | 2.60E-77 | CL0125 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g00266 | K14510 | - | csv:101208452 | 801.971 |