Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00267 ATGCTTGACATAACAGAGCTCAGAGCACGAACATTTCTTTCATCAAAATCCGCAGCTGGAACACCTGAATGGATGGCACCAGAGGTACTACGTGATGAGCCGTCAAATGAAAAATCAGATGTTTACAGCTTTGGAGTGATTTTGTGGGAGTTAGCAACTTTGCAACAGCCATGGTGTAATCTAAACCCAGCTCAGGTTGTTGCAGCTGTTGGATTTAAGGGCTTAAGGCTTGAAATCCCACGTGATGTAAATCCCAAATTGGCTTCCTTAATAATGGCTTGCTGGGCCGATGAGCCCTGGAAACGTCCATCTTTTTCCAGCATAATGGAGACCTTGAAGCCAATGACTAAACAAGCACCACCTCAACAAGGTCGTGCCGACACACTCTCAGTTATAGAATCCACAGCCTCAAATTTTGGCGGCGTCTTAATGGGGTGCCGGCAGAAGCAACGGCTCAACTGTAGAGCTGCTACGACTCGATTCCCAGTCACTGTCACCGCCTTTGAATTTCTTTCCCCAGATTTTTATCGAACACTTTGTCGGCGTAATTCTCCTTCTATCGGAGGCTTTTCTGTTCAAAACCCAATGTCATCTTCTTCTGCACACTACCTGTTCGACGTTATGCTTGAACCAGATATAGGAGCTTCGGACCCATTTGTGCTGCTGTGTATGGGAAGTGATGTGCCTCAACCTCTAGAATGTCTTCATGGCCAGCTAGTTCCGCCATTTCTGTGGAAGACTTTCGATCTTGTTGAGGATCCTGCGATTGATCCGATTGTATCTTGGGGTTCAGCAGGGCAGAGCTTTGTGGTTTGGGATCCCGTGGAGTTTTCTAGAGTCATTCTTCCTTCTAATTTCAAGCATAACAACTTCTCCAGTTTTGTCAGACAGCTAAATACTTATGTGGGTATTGCACTACAGCCTTCAATGGCTGCTGTGGTCTGTATACCTGAGGAAATACTCCCCTCCATGTGTTTGAAGGGGATTGAGGAACTTCCATCTCCACCAGATACAAAAGGTGATGGAGCTTCCCCTATGCAAGAAAAATTTCGACCCCACTTGTGTTGTGGGTTCCGCAAGATTGATACAGACAGGTGGGAATTTGCAAATGGAGCTTTCCAACGAGGGAAGAAATACTTATTAAAGAACATTCAGAGGCGCAAATCACCTCATTCAGAGCAGATTGGAAGTTTGATAGGGCCATCTACTGGGGGAGGGAAGTCTGGATTAGAAGATGAAATTGGGAAGTTAAAGAAAGAGAGGAGCATGTTACTGCAGGAGGTTGTTGAATTGCAGCAGCAGCATAAGGGAACTGCTCAGCATGTCATCACGGTAAACCGACGCCTCCGGTCAGCAGAGCAGAGACAGAAGCAGATGATTACTTTCTTGTCGAAGTTACTTCGGAATCCAGAACTCTTGTTTCTCCTGAAGAGAAAGAAGGAACCGAAAGATATCGATTCCGAGAGAATCAAGCGGAAATTTGTTAAGCAGCATAAACATGAAGCTGATGGTTGTACACTGTCCATGGAAGGGAAGATCGAAACAGCAATGGATTTGAATCCAAGCCTGTTTGAAGGACCTTCTGCCTACCTTATGCAGGGAATGGAATCATTTCCAGATAGCATACCCAATTTTCAACTTATGAATGCTTCATCAAGTGATTTAATTGCGTCTGAGGAATTAGCATTCCATGATGGAATTGTAAAACCAAGAGAGGAGCTGAGGATAGAGGCTTCAAAGGCTATTGGGAGTCCTGACTATTTTGGCTCTTTGGCAGAGGATATTCTACAGTCCTCACATCATGGAACTGGATGTATCATTAAACCAGAAGAAATTTGGAATGCATACTTGAATGTCGATGCTAGTACGCCCGGTTCGAGCAACGAGTTGTGGAGCAATCCAGTCGGCTTCGAGGATCAATTTTGGCAAGTTTCTTGCAGGCAGTCTCCAATCTGGGATTTAGGCTCCCAGCAGGCTGGAGATTTGGGCATGGACAAGTGGTCAGCTTCTGGTTTCCCATTCAACGACCAAGATACTCAGGCTTATCCCAAAAATGCAGATCAGACTTAA 2070 45.27 MLDITELRARTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWCNLNPAQVVAAVGFKGLRLEIPRDVNPKLASLIMACWADEPWKRPSFSSIMETLKPMTKQAPPQQGRADTLSVIESTASNFGGVLMGCRQKQRLNCRAATTRFPVTVTAFEFLSPDFYRTLCRRNSPSIGGFSVQNPMSSSSAHYLFDVMLEPDIGASDPFVLLCMGSDVPQPLECLHGQLVPPFLWKTFDLVEDPAIDPIVSWGSAGQSFVVWDPVEFSRVILPSNFKHNNFSSFVRQLNTYVGIALQPSMAAVVCIPEEILPSMCLKGIEELPSPPDTKGDGASPMQEKFRPHLCCGFRKIDTDRWEFANGAFQRGKKYLLKNIQRRKSPHSEQIGSLIGPSTGGGKSGLEDEIGKLKKERSMLLQEVVELQQQHKGTAQHVITVNRRLRSAEQRQKQMITFLSKLLRNPELLFLLKRKKEPKDIDSERIKRKFVKQHKHEADGCTLSMEGKIETAMDLNPSLFEGPSAYLMQGMESFPDSIPNFQLMNASSSDLIASEELAFHDGIVKPREELRIEASKAIGSPDYFGSLAEDILQSSHHGTGCIIKPEEIWNAYLNVDASTPGSSNELWSNPVGFEDQFWQVSCRQSPIWDLGSQQAGDLGMDKWSASGFPFNDQDTQAYPKNADQT 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1203588 1210628 + CmoCh14G002670.1 Cmo14g00267 395533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00267 689 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 357 684 - -
Cmo14g00267 689 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-3 229 303 - -
Cmo14g00267 689 SMART hsfneu3 239 387 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo14g00267 689 Gene3D Transferase(Phosphotransferase) domain 1 2 127 - -
Cmo14g00267 689 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00267 689 Gene3D - 236 388 IPR036388 -
Cmo14g00267 689 PRINTS Heat shock factor (HSF) domain signature 243 266 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo14g00267 689 PRINTS Heat shock factor (HSF) domain signature 281 293 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo14g00267 689 PRINTS Heat shock factor (HSF) domain signature 294 306 IPR000232 GO:0003700|GO:0006355|GO:0043565
Cmo14g00267 689 SMART tyrkin_6 1 112 IPR020635 GO:0004713|GO:0006468
Cmo14g00267 689 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 357 684 IPR027725 -
Cmo14g00267 689 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 229 303 IPR027725 -
Cmo14g00267 689 Pfam Protein tyrosine and serine/threonine kinase 14 112 IPR001245 GO:0004672|GO:0006468
Cmo14g00267 689 SUPERFAMILY Protein kinase-like (PK-like) 14 121 IPR011009 -
Cmo14g00267 689 MobiDBLite consensus disorder prediction 669 689 - -
Cmo14g00267 689 SUPERFAMILY Winged helix DNA-binding domain 241 301 IPR036390 -
Cmo14g00267 689 MobiDBLite consensus disorder prediction 672 689 - -
Cmo14g00267 689 Coils Coil 407 434 - -
Cmo14g00267 689 Pfam HSF-type DNA-binding 243 387 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00442 Cmo14g00267 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00267 Cmo-Chr14:1203588 Cmo09g00582 Cmo-Chr9:2850373 5.10E-43 dispersed
Cmo14g00267 Cmo-Chr14:1203588 Cmo06g00442 Cmo-Chr6:2118798 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10919 PF00447 HSF_DNA-bind 2.70E-25 CL0123 Cmo TF
74827 PF00447 HSF_DNA-bind 2.70E-25 CL0123 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00267 K09419 - csv:101208693 553.903