Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00274 ATGGAAATGGATGATCAATATGCCCTCTCCGATCTCCGCCACCTCATGACTACACCTCCATCTCGCTCCCATTTCCCCTCTTCTTCCTCAATTCCCCACCATGATCTCTTCTCCTCTTCCTCCACTTCCTCCGCCGCCGCCGCCGCCGCCTTCCGCCACCACCACCACCACCATCATACCCCTTACGACCTCATCATGATGATGCCACGTGATACTCTCCCCGACTTCCGTTCCGATTCCGCTGCCACGCCCCCTGCCGTCGTCTCCGCTCCAACAGCTCCCACCGCCTTCGAACTCGAAACTGCCTCACTCGCTGCCGACTGCGCCACGCCCCGATGGCCTCGCCAGGAAACTCTCACTCTCTTGGATATCAGATCTCGACTCGATTCTAAGTTCAAAGAAGCGAACCAAAAAGGACCCCTTTGGGATGAAGTTTCAAGAATCATGGCTGAGGAACACAATTATCAAAGAAGTGGGAAAAAATGCAGAGAAAAGTTTGAGAATTTGTATAAATATTACAAAAAGACAAAGGAAGGCAAAGCTGGAAGACAAGATGGTAAGAACTACAGATTCTTCAGGCAGTTGGAAGCTCTCTATGGTGAAACAACCAATTCAGCTCAACTTCCAGATTCCCATTTTGTTGGAGACAGCAACCTCAGCTTCCAACAAAATGGGACTAACAATCCGAACACCGCTCTACCAATGAGCTACGAAGCTCAACAGAAGCATTACTGCGACAGCCTCAGCCTCTCTAACACGTCCGAGTTTGAAACCTCAGCCTCGTCGGATGACAACGATGACCTCGGCTCGGTTGGCATTATGGACAACGATTCGGTCGAGAAGAGACGGAAACGACGAGGCGGGAAATGCTGGAAGGCGAAGATCAAACAGTTTATCGACTCGCAAATGAGGAAGCTCATTGATAAACAAGAGGCTTGGTTGGAGAAGCTCATGAAAACTCTTGAACAAAAGGAAAAGGATAGAATGATTCGTGAGGAGGAATGGAGGAGACAAGAAGTGTCAAGAATGGACCGAGAGAGGAGCTTTTGGGCAAAGGAGAGAGCATGGATAGAGGCTAGAGATGCAGCATTAATGGAAGCATTGCAAAGGCTAACGGGACGAGAATTGAGAGACTACAACTCCTCGCCCGACCACGGATTAATTGCACCGGAGCGTCATCGGAATAACAGCGATAACCAAAACGAAGACGGGAGCGAAATACTAAACAACAACACCGGTAGAGAACTAGTAGACAACAATAATTACCAAAGGAAAACAATAGATGAAGGCAACAAGAAACGCAAGGAGAATTCAAGATCAGCCACCACCTACAATCTTTACTTCCAAACAGATTCCTCCCTCTACAGCGGCGGAGGACCTTGCGGCGGTGGTGCCGAGATCAAAGAACAAAGTCCAAACAGCTCGAACGCTGGCGGCGGGGGTGGCGGGGGCGGTGGCAGCCATGTGGTGCAAGATAGTTGCTTTCGGTTCTTGATGGGTGAAGGAGATCAGTCTCAATCTGGTTTGTGGGAAAATTTTGGTCTGAAACTCAACAATGGAAGTGACCAAAGTTGA 1575 49.4 MEMDDQYALSDLRHLMTTPPSRSHFPSSSSIPHHDLFSSSSTSSAAAAAAFRHHHHHHHTPYDLIMMMPRDTLPDFRSDSAATPPAVVSAPTAPTAFELETASLAADCATPRWPRQETLTLLDIRSRLDSKFKEANQKGPLWDEVSRIMAEEHNYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKNYRFFRQLEALYGETTNSAQLPDSHFVGDSNLSFQQNGTNNPNTALPMSYEAQQKHYCDSLSLSNTSEFETSASSDDNDDLGSVGIMDNDSVEKRRKRRGGKCWKAKIKQFIDSQMRKLIDKQEAWLEKLMKTLEQKEKDRMIREEEWRRQEVSRMDRERSFWAKERAWIEARDAALMEALQRLTGRELRDYNSSPDHGLIAPERHRNNSDNQNEDGSEILNNNTGRELVDNNNYQRKTIDEGNKKRKENSRSATTYNLYFQTDSSLYSGGGPCGGGAEIKEQSPNSSNAGGGGGGGGGSHVVQDSCFRFLMGEGDQSQSGLWENFGLKLNNGSDQS 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 1239386 1242065 - CmoCh14G002740.1 Cmo14g00274 395540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00274 524 MobiDBLite consensus disorder prediction 421 439 - -
Cmo14g00274 524 MobiDBLite consensus disorder prediction 376 440 - -
Cmo14g00274 524 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 420 511 - -
Cmo14g00274 524 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL 40 418 - -
Cmo14g00274 524 CDD GT1 111 177 - -
Cmo14g00274 524 Gene3D - 113 175 - -
Cmo14g00274 524 MobiDBLite consensus disorder prediction 18 38 - -
Cmo14g00274 524 MobiDBLite consensus disorder prediction 460 486 - -
Cmo14g00274 524 MobiDBLite consensus disorder prediction 401 420 - -
Cmo14g00274 524 PANTHER - 420 511 - -
Cmo14g00274 524 PANTHER - 40 418 - -
Cmo14g00274 524 Pfam Myb/SANT-like DNA-binding domain 111 198 IPR044822 -
Cmo14g00274 524 Coils Coil 307 334 - -
Cmo14g00274 524 MobiDBLite consensus disorder prediction 376 400 - -
Cmo14g00274 524 ProSiteProfiles Myb-like domain profile. 112 170 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo06g00452 Cmo14g00274 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01491 Cmo-Chr4:7646202 Cmo14g00274 Cmo-Chr14:1239386 1.88E-83 dispersed
Cmo06g00219 Cmo-Chr6:1181729 Cmo14g00274 Cmo-Chr14:1239386 1.02E-12 dispersed
Cmo14g00274 Cmo-Chr14:1239386 Cmo18g00936 Cmo-Chr18:10531114 7.22E-87 dispersed
Cmo14g00274 Cmo-Chr14:1239386 Cmo06g00452 Cmo-Chr6:2157372 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10920 PF13837 Myb_DNA-bind_4 1.40E-19 CL0123 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00274 - - cmos:111441376 986.482