Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g00369 | ATGAACAACTCCACAGGCTCCGGCGGATCAGATGCCACCGGCAACGTCGGCACTTTCCCCTACATAGTCGGAATTTCAGTCGGAGTTCTTTTCCTTCTCACAACCGTAACAATCGCCACCTATTTATGCACCAGAACCACCGTTCCGCAGCCGAATCGCCGTCGTCGGCCGGGGGAACGGCGGGATGCCATCGTCGATTTCGGACCGGGGCTCGAAGATGAGGCCATTAATGAATATCCGAAGATTCTGTACTCGGAAAAGAAATTGGAGGGAAAATTGGAGTCCGCCGCCGCGAGCGGTTGTTCGATTTGTTTGGGGGACTATAAAAACGAGGATGTTCTGCGGTTGTTGCCGGATTGTGGTCATATGTTTCACAGCGGCTGTATCGATCCGTGGTTAAGGCTGAACCCTAGCTGCCCTGTTTGCAGAACTTCCCCGGTGCCGACGCCGCTTTCGACCCCTCTGGCGGAGGTGGTTCCGTTGGCCAACGGAAGGAGTTGA | 501 | 55.09 | MNNSTGSGGSDATGNVGTFPYIVGISVGVLFLLTTVTIATYLCTRTTVPQPNRRRRPGERRDAIVDFGPGLEDEAINEYPKILYSEKKLEGKLESAAASGCSICLGDYKNEDVLRLLPDCGHMFHSGCIDPWLRLNPSCPVCRTSPVPTPLSTPLAEVVPLANGRS | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 1709505 | 1710005 | + | CmoCh14G003690.1 | Cmo14g00369 | 395635 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g00369 | 166 | Pfam | Ring finger domain | 101 | 143 | IPR001841 | - | |
Cmo14g00369 | 166 | SUPERFAMILY | RING/U-box | 75 | 148 | - | - | |
Cmo14g00369 | 166 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 143 | IPR001841 | - | |
Cmo14g00369 | 166 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 61 | 148 | IPR013083 | - | |
Cmo14g00369 | 166 | PANTHER | RING-H2 FINGER PROTEIN ATL71-RELATED | 9 | 164 | - | - | |
Cmo14g00369 | 166 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 9 | 164 | IPR045899 | - | |
Cmo14g00369 | 166 | SMART | ring_2 | 101 | 142 | IPR001841 | - | |
Cmo14g00369 | 166 | CDD | RING-H2_PA-TM-RING | 101 | 143 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo05g00490 | Cmo-Chr5:2312974 | Cmo14g00369 | Cmo-Chr14:1709505 | 1.58E-35 | dispersed | |
Cmo06g01078 | Cmo-Chr6:8339772 | Cmo14g00369 | Cmo-Chr14:1709505 | 1.23E-33 | dispersed | |
Cmo14g00369 | Cmo-Chr14:1709505 | Cmo14g02129 | Cmo-Chr14:15390320 | 7.37E-27 | dispersed | |
Cmo16g00843 | Cmo-Chr16:4449883 | Cmo14g00369 | Cmo-Chr14:1709505 | 5.81E-14 | transposed | |
Cmo14g00369 | Cmo-Chr14:1709505 | Cmo03g01106 | Cmo-Chr3:8935077 | 3.58E-54 | wgd | |
Cmo14g00369 | Cmo-Chr14:1709505 | Cmo07g00849 | Cmo-Chr7:4015530 | 1.82E-43 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g00369 | - | - | mdm:103454174 | 191.045 |