Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00436 ATGCTCCAACAGCGTCTGTTTGGGTATTTTAATGTCGTTTTCTATTTGACGATTCTGACATCGCTGGCTAGGGCCTTCACTAATCCGTCGGATGTTGCAGCTCTTCAGGATCTGTACAGTGCCATGAACTATCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCTTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTTCTCTGTAATGTACCTTAAGCTCCATGGACTAAATCTCACTGGGAATCTTGGAGGACGGCTCAACAATCTCATAAATTTGAAGCAAATGGATGTTAGCTCTAATAGACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCATATAAATATGGCATTCAACCGTTTAAGCAAAAATCTTCCACATACTTTATCTTACATGGGAAATCTCCGACATATAAATCTGAGCCATAATACTCTATCTGGTGTGCTTGGAAATGTGTTTGCTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTTGCTGGAGATTTGCCAAATTCCTTCAGTTCTCTGACGAACATCACTAGACTGTTCTTGCAGCATAACCAATTCACTGGATCAGTTGCCTACTTGTCCCACCTTCCATTAATTGACTTGAACATCCAAGACAATTATTTTAATGGCATTATTCCAGACAATTTTAGAAACATTCCAAATTTGTGGATTGGGAGCAATAGGCTTCGTCCACAAGTTAATTCTCCACCCTGGGATTTTCCCCTGGGAAAAGATCCTATAATGCAGAACATCAGTGGTCCTCCAACAACCAAGTCAAACGCCATCCAGAATTATCCCTCTCGTGGTGCCGTGAGGCATGAGAAGAGAAGGCATGGTTCTGGTGGAATAGGTCTCCTGGTAGGAGGAGTGACACTAGTAGTAACCTTTGCAGCTCTCTTTGTCGTATTTTCCATGAAGAAAGTTCATGAAAAGAAAATAAATTTGAAGATTAGCAATACGTTACCTCGTTCTCTTTCTCTGGGCAAAGCTGAAGATGGTTCATCAACTGCACCAGAAGAAGGCTCACAAAGCTTGCCCCTGAGTTCTCAATTCATGAGCTGTCCAAGGCCTATACCTATATTAAATCACACGAGAACCGAGAAATTTTCAGGAAGAAAAGGTTTCTCAAACAGATGTAGGCTCCCAGTGAGAACAAAAATTTACACCCTGGCAGAGGTTCAATCTACTACAAACAACTTTAGTCAAGAGAATCTTCTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCAGTAAAAAATCTCAACATGGGAGCTCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGGGGCACCCGAACATTGTTACGCTGCTTGGATATTGTGTAGAGCATGGACAACATATTCTCGGATATGAATACGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCTAGGGCTTTAGATTATTTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAGTCTGAAGGCTGCCAACATCTTACTCGATGAAGAACTGATGCCTCGTATTTGTGATTGTGGGCTGTCTGTTTTGAGGCCATTTGTGACCAATGGAGTTAAAACGAAGGCTTCTGAGATTGTCAGCGGTGACATAGGCTACCTTGCACCTGAACATGGGCAGCCAGGATTTGATAATACTAGAAGTGACGTGTATACCTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGAAGAAAACCATTTGACAATTCGAAACCGAGGGAAGAGCAATCGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAAGCATTAAAGGAACATTTTCCTCTAACTCCCTCTCACGCTTTGTCGATATCATCTCCCTTTGTATACAGCCTGCGAAGGAATTCCGACCGCCAATGTCCGAAATAGTGGAACATTTAACGAATCTTCAAAGGAAGATGGAGATGGCCAAACGTGCTGCTATAGAAGGAACTGAAGTGGATCTTTTTGAAAAATCATTTCGTTCTACCAACACTGGCTACTCTCAGTTTACACTCCGCTCTGCTCTGCTTTCTTTGGACCTTTTGACGTTCTTTACTGCTCGAAAATCTACGAGAAGCAGTTCGACTGACCCGAAATTTCTACATTCCTCGTTACATTTCCGCTCTGCTCTGCTGATTCGTTTTGCGGATTGGTTGCGATTGAAGAAAAAAACGTCTAAACTGGTGGTGATCTCTCAAGAAATGGCCCACCTCCGTGCGGTAATGTATTTCAGTGTCATTGTCTTCTTGGCGACTCTGACTTCAGTCGTTCAGTGCTTTACTGACCCGCAGGATGTTTTAGCTCTTCTCAATCTGTATAGTACCCTAAACTACCCACCTGAGCTTAAAGGATGGAGAACAAATGGTGGGGATCCTTGCGGTGGAACGGATGTTAGCTGCAATAAAATTCTGGGTGAAATTCCTTCCGGGTTACCCCCGAATGTCACTTATATGAATCTAAGCCATAATGTGCTATCTGGCCCCATTGCAAATGTTTTTTCTGGCCTACAAAATCTTGTGGAGATGGATCTGTCATATAACAACTTCACTGGAGATTTATCAAATTCATTTGCTGCTCTGACTAATATCAATAGACTGAACATCCAAGACAATTACTTTAGCGGCACTATTCCAGAGCATTTTAAGACAATTCCACATTTATGGATTGGGGGAAATGGGTTCGATGTAAGTAAATCTCCACCCTGCGATTTTTCCTTGGAAAAAGCACCTTTGACGTACAACAATAGCAGGCCTCCATTAACTGAGTCAATTATCATCGAGAAATGTCCCTACAAGAAAAAGGTTGGGAAAAAGGGGGGGAAATTAGGTCCTGGTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTGATAATCCTTGCAGCTCTATTTATTGCAATCTGCAAGACTCAAATATGTGCAAAGAAAGGGAGCGTGAAGCACGTAAACATGTCTCTTCCAATCAGCACAGCTGCAGTTATTCCACCAGATGATAGTCCAAATATCTTGCCTGTCGGTTCTCCAGTCATACGTGGCGGTCCAAATCGTGCCTGTTCTACTCGTCATGCCAGAACTGTGAGGGCATATGGCAGAAGAAGTTTCTCTAGGAGATCCAGGTTCCCAGTGAAAACAAAAACTTACACCGTGACTGAGCTTGAGTCTGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCCGATGGCCAAATTTTGGCTGTGAAAATGGTTGATATGGCAGCACTCTCTTTCACAGAAGAACAACAGTTTTTGGATGTGGTCTGCACTATTACTCGTCTGAGGCATCCTAACATTGTTAGCCTTCTTGGATATAGTGTAGAGAACGGGCAACATCTACTAGCCTATGAGTATGTCGGGAATCTGTCTCTTGATGATGCTCTGCACAGCGTCGGACAAAACCCTCTATCGTGGAGTGTTCGACTCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCTTTTTTCCCCCCATTGGCGCACTTCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTAATGCCGAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGCTGCTCAAATAGCTATTGCTGACACTGGCTACTTTGCACCTGAATATGGCCAGTCTGGGATTGATTATACCAAAAATGATGTGTATGCATTCGGTGTATTGCTTTTGGAGCTTATTACAGGAAAAAAACCGAATGATTTGAGACCAGGGATCGAGCAATCTCGGTTAAGACGGGCGTCATTTCAGCTTCACGATTGTGGGAGTCTAGACGAGATTATCGATCCTGACATTAAAGGAACAATATCCTCCAAGGTTCTCTCTCGCTATGCTGATATTATCACCCTTTGTATACAGCCTGTAACGAAGTGTCGGCCTCCTATGTTCGCCATTGTCGGGTACCTGACAAGTATTCGGAGAAGGGTCGAGATGGAAAAACATGCTGCAGTAGTAGCTTTGCCAAAGGGTATCATCAAATTTGACTACGAAGGAAGGCACTCGAAGTACTTGGAGGATGATGATACGCCAATAATGAAAACGATCAAAGGTGCTACTACAGGATTTGTTTCTGGGACCATTTTTGGGACAATTGCTGCCACTTGGTATGATGTGCCCCGTGTTGAGAGAAATGTTGCTCTGCCCGGGCTTGTGAGAACCTTGAAAATGATGGGAAACTATGGGATGACATTTGCTGCTATTGGAGGGGTATACATTGGCGTTGAGCAGCTTGTGCAGAATTATAGAATGAAAAGAGACTTCGTTAATGGAGCTATAGGTGGTTTTGCAGCTGGAGCATCTGTTCTCGGATATAAAGACAGGAACCCAAGCCATCTTGTACACTGGAATGTGTTGTCTTTGCCTATTGATTGTGGTGGGCTGGGGCTACTTGAGAAAGAAAAAATAGTACTGGTCGCAATGGGAAAAAGTATTCCAACAGCCATTTCTGCTGGAGCTGCTTTGGCAGTTACTTCTGCACTAATTGATGTTGGTGGTCAGACCACAAGAATTGACAATGGCAAGGAGTACTACCCTTACACCACCAAGAAAAGATCCCACATCGAGTAG 4812 43.45 MLQQRLFGYFNVVFYLTILTSLARAFTNPSDVAALQDLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGFSVMYLKLHGLNLTGNLGGRLNNLINLKQMDVSSNRLTGEIPHNLPPNATHINMAFNRLSKNLPHTLSYMGNLRHINLSHNTLSGVLGNVFAGLQNLREMDLSYNDFAGDLPNSFSSLTNITRLFLQHNQFTGSVAYLSHLPLIDLNIQDNYFNGIIPDNFRNIPNLWIGSNRLRPQVNSPPWDFPLGKDPIMQNISGPPTTKSNAIQNYPSRGAVRHEKRRHGSGGIGLLVGGVTLVVTFAALFVVFSMKKVHEKKINLKISNTLPRSLSLGKAEDGSSTAPEEGSQSLPLSSQFMSCPRPIPILNHTRTEKFSGRKGFSNRCRLPVRTKIYTLAEVQSTTNNFSQENLLGEGSLGAVYRAEFPDGQVLAVKNLNMGALSFTEEEQFLDVVWTASRLGHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCSLKAANILLDEELMPRICDCGLSVLRPFVTNGVKTKASEIVSGDIGYLAPEHGQPGFDNTRSDVYTFGVLLLELVTGRKPFDNSKPREEQSLVKWASSRLHDNESLEQMVDPSIKGTFSSNSLSRFVDIISLCIQPAKEFRPPMSEIVEHLTNLQRKMEMAKRAAIEGTEVDLFEKSFRSTNTGYSQFTLRSALLSLDLLTFFTARKSTRSSSTDPKFLHSSLHFRSALLIRFADWLRLKKKTSKLVVISQEMAHLRAVMYFSVIVFLATLTSVVQCFTDPQDVLALLNLYSTLNYPPELKGWRTNGGDPCGGTDVSCNKILGEIPSGLPPNVTYMNLSHNVLSGPIANVFSGLQNLVEMDLSYNNFTGDLSNSFAALTNINRLNIQDNYFSGTIPEHFKTIPHLWIGGNGFDVSKSPPCDFSLEKAPLTYNNSRPPLTESIIIEKCPYKKKVGKKGGKLGPGGIAIVAGGGGFVIILAALFIAICKTQICAKKGSVKHVNMSLPISTAAVIPPDDSPNILPVGSPVIRGGPNRACSTRHARTVRAYGRRSFSRRSRFPVKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKMVDMAALSFTEEQQFLDVVCTITRLRHPNIVSLLGYSVENGQHLLAYEYVGNLSLDDALHSVGQNPLSWSVRLQIAHGVAKALDYLHNAFFPPLAHFNLKAANIMLDEELMPKICDCGLSVLKPLAAQIAIADTGYFAPEYGQSGIDYTKNDVYAFGVLLLELITGKKPNDLRPGIEQSRLRRASFQLHDCGSLDEIIDPDIKGTISSKVLSRYADIITLCIQPVTKCRPPMFAIVGYLTSIRRRVEMEKHAAVVALPKGIIKFDYEGRHSKYLEDDDTPIMKTIKGATTGFVSGTIFGTIAATWYDVPRVERNVALPGLVRTLKMMGNYGMTFAAIGGVYIGVEQLVQNYRMKRDFVNGAIGGFAAGASVLGYKDRNPSHLVHWNVLSLPIDCGGLGLLEKEKIVLVAMGKSIPTAISAGAALAVTSALIDVGGQTTRIDNGKEYYPYTTKKRSHIE 1603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2060987 2078542 + CmoCh14G004360.1 Cmo14g00436 395702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00436 1603 Coils Coil 684 704 - -
Cmo14g00436 1603 Pfam Protein kinase domain 416 690 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00436 1603 Pfam Protein kinase domain 1117 1375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00436 1603 Gene3D Transferase(Phosphotransferase) domain 1 1196 1402 - -
Cmo14g00436 1603 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 11 708 - -
Cmo14g00436 1603 Pfam Tim17/Tim22/Tim23/Pmp24 family 1428 1516 - -
Cmo14g00436 1603 ProSiteProfiles Protein kinase domain profile. 415 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00436 1603 PANTHER LEUCINE RICH REPEAT KINASE 2 802 853 - -
Cmo14g00436 1603 SUPERFAMILY L domain-like 817 952 - -
Cmo14g00436 1603 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 802 853 - -
Cmo14g00436 1603 PANTHER LEUCINE RICH REPEAT KINASE 2 11 708 - -
Cmo14g00436 1603 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE 1-LIKE PROTEIN 856 1401 - -
Cmo14g00436 1603 Pfam Leucine rich repeat N-terminal domain 821 859 IPR013210 -
Cmo14g00436 1603 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Cmo14g00436 1603 ProSiteProfiles Protein kinase domain profile. 1117 1399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00436 1603 SUPERFAMILY Protein kinase-like (PK-like) 391 692 IPR011009 -
Cmo14g00436 1603 Gene3D Ribonuclease Inhibitor 27 259 IPR032675 -
Cmo14g00436 1603 Gene3D Ribonuclease Inhibitor 818 993 IPR032675 -
Cmo14g00436 1603 SUPERFAMILY Protein kinase-like (PK-like) 1100 1399 IPR011009 -
Cmo14g00436 1603 Pfam Leucine rich repeat 871 930 IPR001611 GO:0005515
Cmo14g00436 1603 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Cmo14g00436 1603 MobiDBLite consensus disorder prediction 341 365 - -
Cmo14g00436 1603 Gene3D Transferase(Phosphotransferase) domain 1 493 716 - -
Cmo14g00436 1603 SUPERFAMILY L domain-like 27 238 - -
Cmo14g00436 1603 Gene3D Phosphorylase Kinase; domain 1 381 492 - -
Cmo14g00436 1603 Gene3D Phosphorylase Kinase; domain 1 1078 1194 - -
Cmo14g00436 1603 PANTHER LEUCINE RICH REPEAT KINASE 2 856 1401 - -
Cmo14g00436 1603 SMART LRR_typ_2 94 118 IPR003591 -
Cmo14g00436 1603 SMART LRR_typ_2 188 211 IPR003591 -
Cmo14g00436 1603 SMART LRR_typ_2 164 187 IPR003591 -
Cmo14g00436 1603 SMART LRR_typ_2 140 163 IPR003591 -
Cmo14g00436 1603 SMART LRR_typ_2 894 917 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00436 Cmo-Chr14:2060987 Cmo18g00544 Cmo-Chr18:4215426 4.69E-111 dispersed
Cmo06g00081 Cmo-Chr6:488448 Cmo14g00436 Cmo-Chr14:2060987 2.37E-166 transposed
Cmo14g00436 Cmo-Chr14:2060987 Cmo06g00080 Cmo-Chr6:482992 3.02E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74833 PF00069 Pkinase 8.70E-33 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00436 - - cpep:111791529 1386.32