Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00462 ATGGAAAATCACGGCGATGATCCAAATAGCTCCGAGAGGGCGGAGCCGGTGAGGTCACGGTGGACGCCGAAGCCGGAGCAGATTCTGATTCTTGAATCTATTTTCAATAGTGGAATGGTGAATCCACCAAAAGATGAGACGGTCAGAATTAGAAAGCTGCTTGAGAAATTTGGCTCTGTTGGCGACGCCAATGTTTTCTACTGGTTTCAGAATCGCCGCTCCCGGTCTCGCCGCCGCCAGCGTCAGCTTCAGGCTGCCGCTACTCATCAAGCTACCGGCGGTGGCGGTGGTGGTGGTGGTGGTGGTGGCGATAACGGCGGTCGCTACAATAGTGGTGTTATGAATTTTGCTGGTTCCTCCTCTTACTTCGGAGGTGGGTCGTCGTCGTCGTCGTCCTCTGCTTCTGGTGGCGGTGGCGGCGGTGGTAGTAGTGAAAGTGGGTGTTTTTCCATGGTGGGTCATATGGGTTTGTCGGAAATTGATCAGCAGATGGGTGTGGCGCCGTCTTTTTGTCCGCCGGAAACCTTAAACTTGGAGTTTCAATCAGGGTATAATATTATAATATTCATAAATGGAGTTCCAACAGAAGTGCCAAAAGGGCCAGTGGACATGAAGGCAATGTTTGGGCAAGAGACAGTGTTGGTTCATTCATCAGGACTCCCAGTTCTTACCAATGAATTTGGAATCTCTCTGCACTCTTTGCAGCATGGTGAAAGCTATTTTCTGGTTTCAAGACCGACATGA 744 50.4 MENHGDDPNSSERAEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQLQAAATHQATGGGGGGGGGGGDNGGRYNSGVMNFAGSSSYFGGGSSSSSSSASGGGGGGGSSESGCFSMVGHMGLSEIDQQMGVAPSFCPPETLNLEFQSGYNIIIFINGVPTEVPKGPVDMKAMFGQETVLVHSSGLPVLTNEFGISLHSLQHGESYFLVSRPT 247
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 2226971 2229292 + CmoCh14G004620.1 Cmo14g00462 395728
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00462 247 PANTHER WUSCHEL-RELATED HOMEOBOX 11 9 246 - -
Cmo14g00462 247 MobiDBLite consensus disorder prediction 77 106 - -
Cmo14g00462 247 PANTHER WUSCHEL-RELATED HOMEOBOX 11 9 246 IPR044558 GO:0003700|GO:0048830
Cmo14g00462 247 ProSiteProfiles 'Homeobox' domain profile. 14 79 IPR001356 GO:0003677
Cmo14g00462 247 MobiDBLite consensus disorder prediction 1 20 - -
Cmo14g00462 247 SUPERFAMILY Homeodomain-like 10 86 IPR009057 -
Cmo14g00462 247 MobiDBLite consensus disorder prediction 1 21 - -
Cmo14g00462 247 SMART HOX_1 16 83 IPR001356 GO:0003677
Cmo14g00462 247 Gene3D - 18 85 - -
Cmo14g00462 247 Pfam Homeodomain 18 78 IPR001356 GO:0003677
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01301 Cmo-Chr3:9804730 Cmo14g00462 Cmo-Chr14:2226971 3.77E-15 dispersed
Cmo07g00209 Cmo-Chr7:1051693 Cmo14g00462 Cmo-Chr14:2226971 1.31E-15 dispersed
Cmo14g00462 Cmo-Chr14:2226971 Cmo13g01029 Cmo-Chr13:8676452 2.78E-16 dispersed
Cmo14g00462 Cmo-Chr14:2226971 Cmo06g00062 Cmo-Chr6:391721 1.54E-109 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10943 PF00046 Homeodomain 6.20E-13 CL0123 Cmo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00462 - - csv:101207317 326.635