Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00487 ATGGCTTCTGGGGCTCGATTGCTTGTGCTGGATTTTGCCCTATCTTTTATGTGGTTATGGTCGGGGGTTTTGGTTAAGATCTTTGTTTTTGGGGTATTGGGGTTCGGAAATGATCCGATTGGCGAGGTTGTCAAGGCTGTCTTTTCGATTCTTAACATGTTCTTGTTCGCGTTCTTGGTGAAAATTTCAAAAGGGGCGGCTTACAATCCTCTTAATGTCTTGTCGGCTGCTTTTTCTGGGGGTTTCAGTAGCTTTCTCTTCACTGCTGGTGCCAGAATTCCTGCTCAGGTACTTGGAGCTGTCACTGCTGTTAGGCTGATTATCCACACGTTTCCCGAAGCAGGACGAGGACCCCGTTTGAATGTTGGCATCCATCACGGTGCGTTGACAGAAGGGTTGTTAACGTTCGGCATCGTCTTCATCTCACTCGGACTTTCAAAGAAAATCCCTGGAAATTTCTTCATGAAGACTTGGATATCAAGTTTCTCCAAGTTAACACTTCATGTTCTTGGTTCTGACTTAACTGGTGGCTGTATGAACCCCGCATCCGTAATGGGATGGGCATACGCTCGTGGGGAACATATAACGAAAGAACACATTCTTGTATACTGGATCGCTCCGATTCAAGGAACTATAGCAGCGGTATCGACGTTTAAGATACTATTTCGAAAACCAAAAGAGGAGGAAGTAAATACAAAGAAGAAATCAGAATGA 714 44.82 MASGARLLVLDFALSFMWLWSGVLVKIFVFGVLGFGNDPIGEVVKAVFSILNMFLFAFLVKISKGAAYNPLNVLSAAFSGGFSSFLFTAGARIPAQVLGAVTAVRLIIHTFPEAGRGPRLNVGIHHGALTEGLLTFGIVFISLGLSKKIPGNFFMKTWISSFSKLTLHVLGSDLTGGCMNPASVMGWAYARGEHITKEHILVYWIAPIQGTIAAVSTFKILFRKPKEEEVNTKKKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2417509 2420613 + CmoCh14G004870.1 Cmo14g00487 395753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00487 237 Gene3D Glycerol uptake facilitator protein. 3 235 IPR023271 -
Cmo14g00487 237 Pfam Major intrinsic protein 53 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00487 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 - -
Cmo14g00487 237 PANTHER AQUAPORIN SIP2-1-RELATED 4 237 IPR044226 GO:0015267
Cmo14g00487 237 SUPERFAMILY Aquaporin-like 6 235 IPR023271 -
Cmo14g00487 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00487 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00487 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00487 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00487 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01221 Cmo-Chr7:6647349 Cmo14g00487 Cmo-Chr14:2417509 1.13E-34 dispersed
Cmo14g00487 Cmo-Chr14:2417509 Cmo06g00036 Cmo-Chr6:241017 4.62E-126 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00487 K09875 - csv:101214379 405.216