Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00503 ATGGGATACTTGCAATCCCTTGGCTGTCTCCTTCAAAATGCAAAGCCTTACATCGTTGTCATCTCCCTCCAATTTGGCTATGGCGGAATGAATATCATCTCTGCCATCTCCCTCAACCACGGTATGAGCCACTACGTTCTCGTTGTCTACCGCCACGCCTTTGCCACAGTCGTCATGGCACCTTTTGCTCTTGTTTTTGAGAGAAAAATGAGACCCAAGATTACGCTTAAGATTTTCGCTCAGCTATTTGTTCTGGCTCTTCTTGGGCCACTGATTGATCAGAACTTCTACTACTTGGGGATAAAAATGACATCCCCAACTTTCGCATGTGCTATAAGCAACACGCTTCCTTCAATGACATTCATCATGGCGCTTCTTTGTAGAATGGAGAAGTTGGAGTTGAAGAGTGTGAGATGCCAAGCCAAGGTGTTTGGAACAATAGTGACGATGGTGGGAGCCATGTTGATGACATTTTATAAAGGAAGTGTCATCAACTTCTTCTGGACTGGGCATGGCCGCCACCCAAACACACCACCCACGGCGGATGCAGCGGCGGCGTCCAACCTTCACAACGACGGAAAGGTCATCAAAGGCTCCATCTTCCTCATCATCGCCACTCTGGCTTGGGCGGCCTTCTTCATTCTGCAAGTCATAACCATGAGAAAATACACAGCCCATCTTTCTCTCACCACCATGGTTTGCTTTTTAGGAACCCTTCAAGCCATTGTTGTCACCTTCGCCATGGAGCACCGCCCTCACGCCTGGGCCATTGGCTGGGACATGAACCTCCTGGCCGCCGCTTATGCGGGGATTGTTTGCTCAGGGTTGGCATATTATCTTCAAGGTTTGGTCATGAAAACAAAAGGGCCAGTTTTTGTTACAGCTTTTTGCCCTCTGGGGACGGTGATTGTTGCCTTCATGGGCTCTCTCATCATGGCTGAGAAGATTTATGTTGGAGGGATAATTGGAGCAGTGCTGATTGCGGTAGGGCTGTACTGTGTCTTATGGGGTAAATGCAAGGGTGTTGAAGACACTGCTGAAGCAGTGAAAGGTGAAGAATTGCCTGTAAAAAACGAAGCCATTGAAGCAACTCAAAAGAAAGAAGGTTTGGCCCTTAGTATTCCACCCAGCATGGAGAAGAAGCTTCAACACACTAATCACCCAAACTAA 1170 47.86 MGYLQSLGCLLQNAKPYIVVISLQFGYGGMNIISAISLNHGMSHYVLVVYRHAFATVVMAPFALVFERKMRPKITLKIFAQLFVLALLGPLIDQNFYYLGIKMTSPTFACAISNTLPSMTFIMALLCRMEKLELKSVRCQAKVFGTIVTMVGAMLMTFYKGSVINFFWTGHGRHPNTPPTADAAAASNLHNDGKVIKGSIFLIIATLAWAAFFILQVITMRKYTAHLSLTTMVCFLGTLQAIVVTFAMEHRPHAWAIGWDMNLLAAAYAGIVCSGLAYYLQGLVMKTKGPVFVTAFCPLGTVIVAFMGSLIMAEKIYVGGIIGAVLIAVGLYCVLWGKCKGVEDTAEAVKGEELPVKNEAIEATQKKEGLALSIPPSMEKKLQHTNHPN 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2492288 2494833 - CmoCh14G005030.1 Cmo14g00503 395769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00503 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cmo14g00503 389 PANTHER WAT1-RELATED PROTEIN 11 356 - -
Cmo14g00503 389 MobiDBLite consensus disorder prediction 367 389 - -
Cmo14g00503 389 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Cmo14g00503 389 Pfam EamA-like transporter family 16 157 IPR000620 GO:0016020|GO:0016021
Cmo14g00503 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 338 - -
Cmo14g00503 389 PANTHER WAT1-RELATED PROTEIN 11 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00503 Cmo-Chr14:2492288 Cmo18g00829 Cmo-Chr18:9683649 7.13E-157 dispersed
Cmo14g00503 Cmo-Chr14:2492288 Cmo14g00505 Cmo-Chr14:2499757 0 proximal
Cmo14g00503 Cmo-Chr14:2492288 Cmo06g00018 Cmo-Chr6:122909 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00503 - - bhj:120090189 578.556