Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g00521 | ATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAACAACAGATTCAAATGAACAGTAGCAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA | 660 | 42.27 | MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN | 219 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 2633524 | 2635328 | + | CmoCh14G005210.1 | Cmo14g00521 | 395787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g00521 | 219 | MobiDBLite | consensus disorder prediction | 156 | 219 | - | - | |
Cmo14g00521 | 219 | Gene3D | - | 10 | 216 | - | - | |
Cmo14g00521 | 219 | ProSiteProfiles | Response regulatory domain profile. | 10 | 152 | IPR001789 | GO:0000160 | |
Cmo14g00521 | 219 | SUPERFAMILY | CheY-like | 8 | 151 | IPR011006 | - | |
Cmo14g00521 | 219 | MobiDBLite | consensus disorder prediction | 191 | 210 | - | - | |
Cmo14g00521 | 219 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 3 | 206 | IPR045279 | GO:0009736 | |
Cmo14g00521 | 219 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR ARR9 | 3 | 206 | - | - | |
Cmo14g00521 | 219 | Pfam | Response regulator receiver domain | 11 | 141 | IPR001789 | GO:0000160 | |
Cmo14g00521 | 219 | MobiDBLite | consensus disorder prediction | 174 | 190 | - | - | |
Cmo14g00521 | 219 | CDD | REC_typeA_ARR | 11 | 147 | - | - | |
Cmo14g00521 | 219 | SMART | REC_2 | 9 | 151 | IPR001789 | GO:0000160 | |
Cmo14g00521 | 219 | Coils | Coil | 153 | 173 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo04g01404 | Cmo-Chr4:7166482 | Cmo14g00521 | Cmo-Chr14:2633524 | 7.64E-68 | dispersed | |
Cmo04g02298 | Cmo-Chr4:17099257 | Cmo14g00521 | Cmo-Chr14:2633524 | 1.74E-69 | dispersed | |
Cmo04g02481 | Cmo-Chr4:18300167 | Cmo14g00521 | Cmo-Chr14:2633524 | 7.00E-58 | dispersed | |
Cmo10g00165 | Cmo-Chr10:747025 | Cmo14g00521 | Cmo-Chr14:2633524 | 4.78E-48 | dispersed | |
Cmo14g00521 | Cmo-Chr14:2633524 | Cmo15g00865 | Cmo-Chr15:4388575 | 9.05E-74 | dispersed | |
Cmo14g00521 | Cmo-Chr14:2633524 | Cmo07g01403 | Cmo-Chr7:8052325 | 1.37E-79 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
10952 | PF00072 | Response_reg | 9.60E-17 | CL0304 | Cmo | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g00521 | K14492 | - | csv:101220810 | 302.753 |