Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00521 ATGGTTATGGCTGCCGATTCTCAGTTCCATGTTCTTGCCGTCGATGATAGCCTCATAGATAGGAAGCTCATCGAGAGGCTGCTCAAAACCTCCTCATATCAAGTTACTACGGTTGATTCAGGGAGCAAGGCCTTGGAATTTCTGGGTTTGATTGAAGAACATCAGCGTACAAACTTCAAATCTCCTTCTTCTTCTTCTTCTTCCTCCTCGAACATTCATCATCAGGAAGTGGAAGTGAATCTTATCATTACTGATTACTGCATGCCTGGGATGACTGGCTTCGATTTGCTCAAGAAAGTTAAGGAATCGACGTCTCTTAGAAACATACCAGTGGTGATAATGTCATCCGAAAACTTACCTTCGAGAATCAGCAGATGTTTAGAAGAAGGCGCGGAAGAGTTCTTCCTGAAGCCAGTTCGATTGTGCGATGTGAATAAACTGAAACCGCACATAATGAAGACGAAATTAAAGGATCAAAATCAAGAAGAAGAAGAAGAAACAACAGAGACCGAATTCGAATCGGTTGAAAAACAACAACAACAACAGATTCAAATGAACAGTAGCAACAAGAGAAAGGCGGGGATGGATGAAGAAGGTGTAGGAGAGGACAGAAGAAGAAGAATAAGGTACAATAGCAATGGCGTCGCGACTGTGAATTGA 660 42.27 MVMAADSQFHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIEEHQRTNFKSPSSSSSSSSNIHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENLPSRISRCLEEGAEEFFLKPVRLCDVNKLKPHIMKTKLKDQNQEEEEETTETEFESVEKQQQQQIQMNSSNKRKAGMDEEGVGEDRRRRIRYNSNGVATVN 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 2633524 2635328 + CmoCh14G005210.1 Cmo14g00521 395787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00521 219 MobiDBLite consensus disorder prediction 156 219 - -
Cmo14g00521 219 Gene3D - 10 216 - -
Cmo14g00521 219 ProSiteProfiles Response regulatory domain profile. 10 152 IPR001789 GO:0000160
Cmo14g00521 219 SUPERFAMILY CheY-like 8 151 IPR011006 -
Cmo14g00521 219 MobiDBLite consensus disorder prediction 191 210 - -
Cmo14g00521 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 206 IPR045279 GO:0009736
Cmo14g00521 219 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9 3 206 - -
Cmo14g00521 219 Pfam Response regulator receiver domain 11 141 IPR001789 GO:0000160
Cmo14g00521 219 MobiDBLite consensus disorder prediction 174 190 - -
Cmo14g00521 219 CDD REC_typeA_ARR 11 147 - -
Cmo14g00521 219 SMART REC_2 9 151 IPR001789 GO:0000160
Cmo14g00521 219 Coils Coil 153 173 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g01404 Cmo-Chr4:7166482 Cmo14g00521 Cmo-Chr14:2633524 7.64E-68 dispersed
Cmo04g02298 Cmo-Chr4:17099257 Cmo14g00521 Cmo-Chr14:2633524 1.74E-69 dispersed
Cmo04g02481 Cmo-Chr4:18300167 Cmo14g00521 Cmo-Chr14:2633524 7.00E-58 dispersed
Cmo10g00165 Cmo-Chr10:747025 Cmo14g00521 Cmo-Chr14:2633524 4.78E-48 dispersed
Cmo14g00521 Cmo-Chr14:2633524 Cmo15g00865 Cmo-Chr15:4388575 9.05E-74 dispersed
Cmo14g00521 Cmo-Chr14:2633524 Cmo07g01403 Cmo-Chr7:8052325 1.37E-79 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10952 PF00072 Response_reg 9.60E-17 CL0304 Cmo TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00521 K14492 - csv:101220810 302.753