Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00573 ATGGGGATTAAATTTTCCAAGCAAGGTCAGGGGAAGGTTGAAAACCTTAGTTTGCAACACCACCTGATGAATTATCTATCCAAAAAATTTTACATCCGTAACTTGGTATCCAAGCAAAGGAGGCGCATGCTTGTTGCTGGCTATGATCTTGACATGTCATACATTACGGATCATATTCTGGCAATGTCATTCCCTGCGGAACGGATGCGTGCTATGTATCGTAATCCCCTATGGCAGGTTAAGTCCGTATTGGACATGAGGCATCAAGGACATTACAAGATCTATAATCTCTGTATTGAAGAATCATATGATCCATCACATTTTCATGGGCGCGTGGAGTCATTTCCTTTTGATGATAATCATGTTCCACCGCTACAGATGATCAAACTCTTCTGTGAAAATGTCTCTTCATGGATATCATCCCACCCAAAGAATATTGCGGTTATACACTGCATGGCTGGGAAAGGTCGAACCGGATTAATGGTATGTGCCTACTTGGTTTACTGTGGCATGTCAGTGGAGGATGCACTTCACCTGTATGCTCAGAGGCGGACGACCAATAATGAAGGAGTATCAATTCCAAGCCAACGGCGGTATGTTGGCTACTGGGCAAAGTGCCTTTCCTTTCCCAAGGGAATTTATAATGGATCTCCTGAGGTGAAGTTGCCCATACCCTGTAGGAGAGAGTTGCAGAGAATTCGTCTTTATGACACAGTTAACACTGAATCAATTTTCTTTGTGGTCTCAGAATCGCAGGAGGTTCCTTCTCAGCTATACCGTCCATCTATGGAACGTACCCGGAGTTGTTGCAGACAATTTAAGAGTGGTTATGAGAGCAGTAACAGTCCTCGTTATTTTTTATCTTTTGTTGAAGGCGAAAATGAAGAGAACAAGTCGGAAGTAGAGCCCCATTTTATTGTTCAGATGGATACAGAGTGTTCAGCACTATACCACAAAACCTGCCTTGACTACAATTTTGAGAAGCCTTTACCTCTAACTGGAGATGTGCGCATTATATTCTACGCAAAGATGTTTGGAGGGCGTCTGTTCTATGCTTGCTTCAACTCAGCTTTCATTAAAAACAGCTTGATACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCGATTTGTGGTCCATCCTTCTGCTTGGAGTTGTTGCGACGATATCACCGCTGCCGCCGCCGTGGAGTGCCTGCCAGATTTGAGAGGTCAACCTGTTCACAGGCGACATTTTGGAACCCGTTGAAGTCTAAACCACTTGGAATGGACCCCAAGCACACAGGAGAGGTTTTGAAACATTTGGAGAAGCAGGATGAGCTTCTTATGGATGCTTATAGATCAATGTCCCATGAACTACATAAACTTCAGGTAGAAGAAGAAATGCTCATGCGCAAGTTCTATGAAATAATGTCTGCTCATGGTCTAACAAAGAAGAGTGAAGATGGTCGTGATAGTTGTGGCGGCGAAAGGAATGCGTTAGCATCTATTACTGATAGCAAATTGGACTAA 1524 43.5 MGIKFSKQGQGKVENLSLQHHLMNYLSKKFYIRNLVSKQRRRMLVAGYDLDMSYITDHILAMSFPAERMRAMYRNPLWQVKSVLDMRHQGHYKIYNLCIEESYDPSHFHGRVESFPFDDNHVPPLQMIKLFCENVSSWISSHPKNIAVIHCMAGKGRTGLMVCAYLVYCGMSVEDALHLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGIYNGSPEVKLPIPCRRELQRIRLYDTVNTESIFFVVSESQEVPSQLYRPSMERTRSCCRQFKSGYESSNSPRYFLSFVEGENEENKSEVEPHFIVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMFGGRLFYACFNSAFIKNSLIQLRLQDLDKVGKKGRSICGPSFCLELLRRYHRCRRRGVPARFERSTCSQATFWNPLKSKPLGMDPKHTGEVLKHLEKQDELLMDAYRSMSHELHKLQVEEEMLMRKFYEIMSAHGLTKKSEDGRDSCGGERNALASITDSKLD 507
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 2920969 2929195 - CmoCh14G005730.1 Cmo14g00573 395839
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00573 507 Pfam C2 domain of PTEN tumour-suppressor protein 318 390 IPR014020 -
Cmo14g00573 507 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Cmo14g00573 507 Gene3D - 275 393 - -
Cmo14g00573 507 ProSiteProfiles C2 tensin-type domain profile. 241 395 IPR014020 -
Cmo14g00573 507 ProSiteProfiles Phosphatase tensin-type domain profile. 41 210 IPR029023 -
Cmo14g00573 507 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 49 205 IPR029021 -
Cmo14g00573 507 Gene3D Protein tyrosine phosphatase superfamily 28 209 IPR029021 -
Cmo14g00573 507 CDD PTP_PTEN 51 205 IPR045101 GO:0016791
Cmo14g00573 507 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Cmo14g00573 507 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 391 - -
Cmo14g00573 507 PANTHER BNAC03G16750D PROTEIN 1 391 - -
Cmo14g00573 507 SMART PTEN_C2_2 223 394 IPR014020 -
Cmo14g00573 507 MobiDBLite consensus disorder prediction 482 507 - -
Cmo14g00573 507 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 292 391 IPR035892 -
Cmo14g00573 507 Pfam Tyrosine phosphatase family 146 186 IPR026893 GO:0004721
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01191 Cmo-Chr11:6958706 Cmo14g00573 Cmo-Chr14:2920969 0 dispersed
Cmo11g01192 Cmo-Chr11:6965092 Cmo14g00573 Cmo-Chr14:2920969 1.49E-36 dispersed
Cmo14g00573 Cmo-Chr14:2920969 Cmo19g00605 Cmo-Chr19:6699930 4.33E-43 dispersed
Cmo14g00573 Cmo-Chr14:2920969 Cmo11g01384 Cmo-Chr11:9670549 1.66E-44 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00573 K01110 - csv:101212127 744.962