Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00596 ATGAGTTGCGTTCAAAATCCTGAGCTTCCCAACCCAGAAACTGTTGTCCATGTTCAAGATTTGGTCTCAGTTGAAAACCCAGATTCCAAACACTCCATTTTTGCTTCTTTGTTTCAAAACCATTACCCTCCTGGCTTTTCCCGAAAGCTGGTGGCGGAGGTGATAGCCACGTACTTGCTAGTGTTTGTGACTTGCGGAGCAGCCGCATTGAGCGCCAGCGACGAACGGAGAGTCTCACAGCTTGGAGCCTCCGTGGCTGGCGGCCTCATCGTGACTGTAATGATCTACGCTGTCGGACACATTTCTGGCGCCCATATGAACCCGGCTGTCACCTTAGCCTTCGCTGCAACTCGACACTTCCCATGGAAACAGGTTCCATTGTATGGAGCAGCACAATTGAGTGGTGCAACTTGTGCGGCCTTTACACTTCGCATATTATTGCATCCCATAAAACAATTGGGCACAACAACGCCATCGGGGACAGACTTTCAAGCTTTGGTCATGGAGATTGTGGTTACTTTCTCAATGATGTTCGTCACATCTGCTGTTGCAACTGACACTAAAGCAATAGGAGAGCTAGCCGGTATGGCAGTTGGGTCAGCTGTGTGTATCACTTCCATCTTAGCTGGACCTGTATCAGGAGGGTCAATGAATCCTGTGAGGACATTAGGACCTGCATTGGCAAGTGAATATTATAAAGGACTTTGGGTGTACTTTGTTGGGCCGGTTACTGGAACTCTATTGGGGGCATGGTCATATAAGTTTATACGTGCCAGTGACAAACCTGTGCACTTAATTTCTCCTCACTCATTTTCGTTCAAACTTCGAAGAATGTCAAGATCAGATGTTAGTGAGGGTGGAAAGTGA 867 47.64 MSCVQNPELPNPETVVHVQDLVSVENPDSKHSIFASLFQNHYPPGFSRKLVAEVIATYLLVFVTCGAAALSASDERRVSQLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAATRHFPWKQVPLYGAAQLSGATCAAFTLRILLHPIKQLGTTTPSGTDFQALVMEIVVTFSMMFVTSAVATDTKAIGELAGMAVGSAVCITSILAGPVSGGSMNPVRTLGPALASEYYKGLWVYFVGPVTGTLLGAWSYKFIRASDKPVHLISPHSFSFKLRRMSRSDVSEGGK 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3016805 3019552 + CmoCh14G005960.1 Cmo14g00596 395862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00596 288 Pfam Major intrinsic protein 46 253 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 ProSitePatterns MIP family signature. 105 113 IPR022357 -
Cmo14g00596 288 Gene3D Glycerol uptake facilitator protein. 15 263 IPR023271 -
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 48 67 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 87 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 124 143 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 168 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 199 221 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PRINTS Major intrinsic protein family signature 236 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PANTHER AQUAPORIN NIP2-1 22 279 IPR034294 -
Cmo14g00596 288 SUPERFAMILY Aquaporin-like 42 266 IPR023271 -
Cmo14g00596 288 CDD MIP 48 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cmo14g00596 288 PANTHER MAJOR INTRINSIC PROTEIN, AQUAPORIN-LIKE PROTEIN-RELATED 22 279 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01044 Cmo14g00596 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01346 Cmo-Chr3:9977225 Cmo14g00596 Cmo-Chr14:3016805 8.83E-73 dispersed
Cmo07g00155 Cmo-Chr7:845702 Cmo14g00596 Cmo-Chr14:3016805 2.93E-66 dispersed
Cmo14g00596 Cmo-Chr14:3016805 Cmo15g01411 Cmo-Chr15:9615452 5.48E-63 dispersed
Cmo14g00596 Cmo-Chr14:3016805 Cmo14g00597 Cmo-Chr14:3025643 5.86E-135 tandem
Cmo11g01044 Cmo-Chr11:5789335 Cmo14g00596 Cmo-Chr14:3016805 2.49E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00596 K09874 - csv:101205692 504.982