Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00638 ATGGCAATGCTCACATGGAAGAAGATACGCCAGACAATGATTGAACAGTTCCAAATCAGAAGACCTTCCGACGAAGAAACCACCATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTTCCGTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCAGTTTCAAATCCCACGACTGCCCGAAATCTGATCGGAACAGTAGAAAAGTTGTGGTCTGTGAAATCTGCTCGATGTCGATCGAGACCACCGGGAAGGACGGCGACGAGAGCAGGATTTTGGAGAGGCATCACGAATCAGGAGATTGCGATCCAAGGAAGAAGAAAAAGCCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGATACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAACGGCGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGA 633 51.97 MAMLTWKKIRQTMIEQFQIRRPSDEETTMAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRSFKSHDCPKSDRNSRKVVVCEICSMSIETTGKDGDESRILERHHESGDCDPRKKKKPTCSARRCREILTFSNTCVCKTCRLKVCLKHRFPAEHNCGRVDTGRWNEKFMAALELRNGGDCGKRGRPTAANGSSPSVKAC 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3213314 3215531 - CmoCh14G006380.1 Cmo14g00638 395904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00638 210 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 29 200 - -
Cmo14g00638 210 SUPERFAMILY AN1-like Zinc finger 37 85 IPR035896 -
Cmo14g00638 210 ProSiteProfiles Zinc finger AN1-type profile. 125 175 IPR000058 GO:0008270
Cmo14g00638 210 Pfam AN1-like Zinc finger 45 82 IPR000058 GO:0008270
Cmo14g00638 210 Pfam AN1-like Zinc finger 131 169 IPR000058 GO:0008270
Cmo14g00638 210 SMART AN1_Zf_4 131 172 IPR000058 GO:0008270
Cmo14g00638 210 SMART AN1_Zf_4 45 84 IPR000058 GO:0008270
Cmo14g00638 210 Gene3D - 107 184 IPR035896 -
Cmo14g00638 210 Gene3D - 30 98 IPR035896 -
Cmo14g00638 210 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 29 200 - -
Cmo14g00638 210 SUPERFAMILY AN1-like Zinc finger 123 170 IPR035896 -
Cmo14g00638 210 ProSiteProfiles Zinc finger AN1-type profile. 39 87 IPR000058 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00638 Cmo-Chr14:3213314 Cmo07g01365 Cmo-Chr7:7736340 1.10E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00638 - - cmos:111442345 449.899