Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00646 ATGGCGAAGCGTTGGGTCCTTTTGGCGGCCATTTTCGCGGTTCTTGTTTGTGGTTTTTCTTCAGTTTCTGCCACACACACAAATTTTGTTGCTGGGGTTTTGTCCAAGGCGGTTTCGGCTCTTGTGAATTGGATATCGGCGATCACCTCGGCCTCTAGTACTGTGGTTTCTACCCGCTCGATGATTACATTTGAGAAGGGATATGTTGTTGAGACTATGTTTGATGGTAGTAAGCTGGGGATTGAGCCTTACTCTGTGGGGGTGTCTCCTAGTGGGGAGCTTCTGATTTTGGATTCTGAAAATAGTAACATCCACAAGATCTCTATGCCATCTTCTCAATTTTGCAGGCCCCAGCTGTTTGCAGGATCGTCTGAAGGATACTCTGGACATGTAGATGGAAAGCCAAGGGATGCAAGAATGAGCCATCCAAGAGGGTTAGCTGTGGATCAGAGAGGAAATATTTACATTGCAGATACAAAGAACAAGGCCATAAGAAAAATCAGTGATGCCGGAGTTACGACTATTGCTGGAGGAAAATGGAGGAAAAGTGGCCATATTGATGGTCCCAGTGAAGAATCAAAATTCTCAAATGATTTTGATGTGGTTTATGTAGGAAGCAGCTGCTCACTTCTGGTAGTCGACAGAGGAAACCAAGCAATTCGGGAGATTCGACTTCGTGCCGAGGATTGTACCGACGAGTTTGATGGTAGCTTCCTCCTAGGGATGGCTCTGCTGACTGCAGCTATGCTTTTGGGATACATGTTGGCACGTCTTCAATTTTGGGTGTTGGCCGCGTTTTCTTCTAAAAATGACTCAAGAGCTGACTCGAGGGACGTTTCATCGATTCCTCCATATCGGAGGGTCGAGAAATCAATGAGGCATCCACTGATTCCCAGTGAAGAGGAAGAAGACAATCAGCCAGGAGAGAATATCATTTGTTCCCTCGGGAAGCTTTTCCTCAACACTGGCTCATCCGCAGCTGAAATCTTCGTGGCATTGCTTCTTGGAGCTAGAAGAAAGGCAGCCAACCTCCACGTCCAGCAGCATTATCAAGTAAACAAACATGGACAAGCAGGGTTGGGCATGCAGGAAAGCTTTGCAATCCCATGTGGCCGTGAACCACTGCATACAATGACTGGGATACATTACTCTTATTCGGCAACACGTCCCGAAAACGTGCAGCGTTACAGGCGCATTAGGTGCGGGGATGGTGTCGAGGAAGAACAACCATATCCAACGAGTCCAAAGGTGTGGTACAACCGGAGCAGTGAAAGAAACGAGGTTGTGTTTGGTGAAGTACAAGAAGAAGAGCAATGCTGTGTTGGAGGTGGTGGCTGTGTGGAAGGGAAATCCTTCAGCAACAACAAACATGAGAACTCTTTTGTTACAGAGAAAAAGGGAATAACAGATTAA 1413 46.71 MAKRWVLLAAIFAVLVCGFSSVSATHTNFVAGVLSKAVSALVNWISAITSASSTVVSTRSMITFEKGYVVETMFDGSKLGIEPYSVGVSPSGELLILDSENSNIHKISMPSSQFCRPQLFAGSSEGYSGHVDGKPRDARMSHPRGLAVDQRGNIYIADTKNKAIRKISDAGVTTIAGGKWRKSGHIDGPSEESKFSNDFDVVYVGSSCSLLVVDRGNQAIREIRLRAEDCTDEFDGSFLLGMALLTAAMLLGYMLARLQFWVLAAFSSKNDSRADSRDVSSIPPYRRVEKSMRHPLIPSEEEEDNQPGENIICSLGKLFLNTGSSAAEIFVALLLGARRKAANLHVQQHYQVNKHGQAGLGMQESFAIPCGREPLHTMTGIHYSYSATRPENVQRYRRIRCGDGVEEEQPYPTSPKVWYNRSSERNEVVFGEVQEEEQCCVGGGGCVEGKSFSNNKHENSFVTEKKGITD 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3254644 3258821 - CmoCh14G006460.1 Cmo14g00646 395912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00646 470 PANTHER POTASSIUM TRANSPORTER 1 439 - -
Cmo14g00646 470 PANTHER - 1 439 - -
Cmo14g00646 470 Gene3D - 27 224 IPR011042 -
Cmo14g00646 470 SUPERFAMILY NHL repeat 62 226 - -
Cmo14g00646 470 Pfam NHL repeat 141 166 IPR001258 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo04g02849 Cmo14g00646 CCT
Cmo14g00646 Cmo15g00337 CCT
Cmo04g02849 Cmo14g00646 ECH
Cmo14g00646 Cmo15g00337 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00646 Cmo-Chr14:3254644 Cmo10g01241 Cmo-Chr10:12494728 1.31E-07 dispersed
Cmo14g00646 Cmo-Chr14:3254644 Cmo15g00337 Cmo-Chr15:1558286 9.07E-124 wgd
Cmo14g00646 Cmo-Chr14:3254644 Cmo04g02846 Cmo-Chr4:20324007 5.78E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00646 - - csv:101216407 696.427