Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00651 ATGAATAGAATCATACAGTCGCCGGCGTCCAAGTTCCGCCCCTTTCGGCGATACCTTGACGGCTCGTCCACCGATAAGACTACCGGCGTGGCGACCGCCACGGACGAACACCCTAATTACATCCTCCTCCGTTACCAAATCCTCGACCCTGACAGCGACATTGTCGCGCAATGGAATCGCTTGTTTCTAGTGACATGCCTGATTGCGCTATTCATCGATCCGATGTATTTCTACACGTCGTCTGTCGGGGGACCTGCCTGCCTGACATCGGAGGTGAATCTGGGAATAGTGATCACGTTCTTCAGAACGGTGATGGATCTGTTCTTCTTGCTGCACATGGTGCTCAAATTTCGAACCGCGTATGTGGCTCCGAGCTCTAGGGTTTTCGGAAGGGGAGAGCTGGTTATGGATGCCAGAGCCATTGCAAAGCGCTATTTGAAATCTGATTTTGTGATTGATCTCGCCGCCACTCTCCCCCTCCCACAAATAGTGATGTGGTTGGTGATTCCAGCAACAAGACATTCAAGGGTGGATCATGCCAACAACACAATCGCTCTCCTTGTTCTTCTCCAATACGTTCCAAGGCTGTTCCTCATCTTCCCTCTCAACCAACGCATCATCAAAACCACTGGCGTTGTTGCCAAAACTGCCTGGGCTGGTGCTGCCTACAATCTCATCCTCTACATGCTTGCCAGTCATGTGTTGGGATCTACATGGTATTTGTTGTCCATAGGGAGACAGTTCGCATGCTGGAAATCAGAGTGTGCAAAGGAAAATGCGTCCAAAGTTCTAACATGTCTTCCCATCTTCTTGGATTGCAACAGTTTGAATGACACTGACAGACAATATTGGCTGAATGTCACTCATGTTACTTCCAAATGCGATCCAAGGAATGAAAACATTAGGTTCAAGTTTGGAATGTTCTCTGATGCTTTCACCAGTGATGTTGCCTCCTCCCATTTCATTGCTAATTCTTACGGGCAAACTTTGGACACAACAACTTACCTTGGCGAGACATTATTTTGCATATCAACGTGCATAGTTGGGTTGATCTTATTTTCACAACTCATTGGCAATATGCAGTTTCTGTTTCACATTTTGAAGACATATTTGCAGTCAATGACAGTAAGACTCGAAGAATGGAGGATAAAGAGAAGGGACACTGAAGAATGGATGCGACGTCGTCAATTACCACCAGATTTGCAAGAACGAGTTCGACGATTCGTTCAATATAAATGGCAGGCCACGAGAGGAGTTAACGAAGAATCTATATTGCGTTCATTGCCCATTGACCTTCGCCGTGAGATTCAACAACATTTGTGTTTGTCGCTCGTTCGTCGTGTTCCTTTCTTCTCACAAATGGACGATCAACTTCTCGATGCCATATGCGAGCGCCTCGTCTCGTCCTTGTGTACCCAAGGAACGTATATCGTACGAGAGGATGACCCAGTTAACGAAATGTTGTTTATTATAAGAGGACAACTAGAGAGCTCGACAACAAATGGCGGTCGTTCTGGCTTTTTCAACTCAATCACATTAAAACCAGGTGATTTTTGTGGTGAAGAACTATTGACATGGGCTTTGATGCCAAGTTCCAGTTTGAATATGCCTTCTTCTACTCGAACCGTCCGAGCACGTACAGAAGTTGAAGCCTTCGCCCTTCGAGCTGAGGATCTCAAGTTCGTCGCTGGACAATTCAAACGCCTGCATAGCAAGAAACTACAACATGCGTTTAGATACTATTCCCATCAATGGAGGACCTGGGGTGCTTGCTTAATTCAAGTAGCTTGGAGGAGGCTTAAGAAGAGAAAATTGGCAAAGAAATCAGTATTCAGAAACAGCTTAAGCTATGGAGATTCTATACAAGAAGATATTGAATACGACGTCGAGCTAGCAGAAGAAAACTACGACGACAACGACGACGACAGTGATGAGGACATGTCTACTGCAGACTACATGAACAAAACTCAGCATCTAGGTGCTACACTTTTGGCTTCAAAGTTTGCTGCCAATACTAGAAAAGGAGTTCATCTAAAAGCCCAAAAATCCAAAGCTTCTAGTTTGAAAATGCCAAAGTTGTTTAAACCAGATGAACCTGATTTTTCTATGGATGGATGA 2118 45.18 MNRIIQSPASKFRPFRRYLDGSSTDKTTGVATATDEHPNYILLRYQILDPDSDIVAQWNRLFLVTCLIALFIDPMYFYTSSVGGPACLTSEVNLGIVITFFRTVMDLFFLLHMVLKFRTAYVAPSSRVFGRGELVMDARAIAKRYLKSDFVIDLAATLPLPQIVMWLVIPATRHSRVDHANNTIALLVLLQYVPRLFLIFPLNQRIIKTTGVVAKTAWAGAAYNLILYMLASHVLGSTWYLLSIGRQFACWKSECAKENASKVLTCLPIFLDCNSLNDTDRQYWLNVTHVTSKCDPRNENIRFKFGMFSDAFTSDVASSHFIANSYGQTLDTTTYLGETLFCISTCIVGLILFSQLIGNMQFLFHILKTYLQSMTVRLEEWRIKRRDTEEWMRRRQLPPDLQERVRRFVQYKWQATRGVNEESILRSLPIDLRREIQQHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLCTQGTYIVREDDPVNEMLFIIRGQLESSTTNGGRSGFFNSITLKPGDFCGEELLTWALMPSSSLNMPSSTRTVRARTEVEAFALRAEDLKFVAGQFKRLHSKKLQHAFRYYSHQWRTWGACLIQVAWRRLKKRKLAKKSVFRNSLSYGDSIQEDIEYDVELAEENYDDNDDDSDEDMSTADYMNKTQHLGATLLASKFAANTRKGVHLKAQKSKASSLKMPKLFKPDEPDFSMDG 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3272989 3276731 + CmoCh14G006510.1 Cmo14g00651 395917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00651 705 Pfam Cyclic nucleotide-binding domain 473 560 IPR000595 -
Cmo14g00651 705 ProSiteProfiles cAMP/cGMP binding motif profile. 450 580 IPR000595 -
Cmo14g00651 705 SUPERFAMILY cAMP-binding domain-like 380 575 IPR018490 -
Cmo14g00651 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 37 703 - -
Cmo14g00651 705 MobiDBLite consensus disorder prediction 679 705 - -
Cmo14g00651 705 SUPERFAMILY Voltage-gated potassium channels 49 364 - -
Cmo14g00651 705 Gene3D - 61 366 - -
Cmo14g00651 705 Gene3D Helix hairpin bin 378 441 - -
Cmo14g00651 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 37 703 - -
Cmo14g00651 705 Pfam Ion transport protein 58 362 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cmo14g00651 705 CDD CAP_ED 450 581 IPR000595 -
Cmo14g00651 705 SMART cnmp_10 450 581 IPR000595 -
Cmo14g00651 705 MobiDBLite consensus disorder prediction 691 705 - -
Cmo14g00651 705 Gene3D Jelly Rolls 448 568 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo10g00459 Cmo-Chr10:2062469 Cmo14g00651 Cmo-Chr14:3272989 0 dispersed
Cmo11g00422 Cmo-Chr11:2075897 Cmo14g00651 Cmo-Chr14:3272989 0 dispersed
Cmo14g00651 Cmo-Chr14:3272989 Cmo02g00904 Cmo-Chr2:5575654 0 dispersed
Cmo10g00139 Cmo-Chr10:641446 Cmo14g00651 Cmo-Chr14:3272989 0 wgd
Cmo11g00106 Cmo-Chr11:553085 Cmo14g00651 Cmo-Chr14:3272989 5.10E-21 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00651 K05391 - csv:101216651 1222.99