Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00677 ATGGCTTCCATTTTCATCCATGGAGTTTCCTTCTTCTTCTTCTTCTTCTTCCTGTTCTTCTCTGTTTCTCTCTCAGATCCCCGAATCTCCGAAGCCGGAAGCATCTGCGGAACCTTCAAGCCTCCGCCCAAATCCCGATTCATCCCAACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCACAACTCGCAATTGGACAACTCACTTCGTCAATTCTACTCCCCCGATGTTTGCCTTATCGCAATGCTTCAACGATCTCTCTCACAACGATTGCCTTCTCTGTTACGCCGCCAGCCGCACCGCCCTTCCTCGTTGCCTTCCCGCCGTCTCCGCCCGGATCTTCCTCGATGGATGCTTCCTCCGGTACGACAATTACAGTTTCTACAAAGAGTCCACCGATTCCCTTAGGGATTCTGTGAATTGTACCTCGGAATTGGGGGAAATCGATGAATCTGATAAGTTAGGGTTTGGAGAGAATGTTAGGGTTGTTGTTGAGAATGTGACGAGGACGGCCATGGCGAATGGCGGATTTGGGATTGGTGAAGTTAATGGACTGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTTGAGCCTGAGGGTTGTAGGGCTTGCTTGGAGAAGGCGAGGAGGAGCATTAGAAGCTGCTTGCCGAGTAGGGAAGGGAGGGCTCTGAATGCTGGGTGCTATTTGAGGTATTCAACTGTGAAGTTCTTCAATGATAAGGCTGAACAACAGGATCATGATGATCAAAACGGATTTTCTGGAAGAAGAGCTGTAGCTGCCATTGTTTTAGCTTCAGTTGCCTCCTTGATCATCGCCATTTCAGCTGCTTTTGCATGCTATACAAGAATATCAAACTTAAAGAAAGAGAAGAAAAAACAATCCCTTATTCCAATTTCCTTTAGGGATTCCGATGTGAATTTCAAGTATGAAACGCTTGAAAAGGCCACTAATTACTTCGGCCCATCAAGTAAGATAGGCCAAGGTGGAGCTGGTTCTGTATATAAAGGAACTCTTCCAAATGGGCAGATTGTTGCTGTGAAGAGGTTGGTTTTCCATACCAGGCAATGGGTTGATGAGTTCTTCAATGAAGTGAATTTGATCCGTGGAATCCAACACAAAAACCTTGTTACCCTTTTAGGCTGCAGCATTGAAGGACCTGAAAGTCTGCTGGTCTACGAGTATGTTCCGAATCGGAGCCTCGATCAGTTCATTTTCGATAAGAACAAGGTTCAGATTCTGAATTGGAAGCAGCGTTTCAATATTATCCTGGGAACAGCTGAGGGGCTTGCACATCTTCATGAAGGTTGTAAGATGAGAATAATCCATAGAGACATAAAGAGTAGTAATGTTCTTCTGGATGAAAATTTCAATCCAAAGATTGCGGATTTCGGCCTCGCTCGGCATTTCGCAGCCGATCAGACTCATCTTAGCACCGGAATTGCCGGGACACTAGGTTATATGGCTCCTGAATATCTCGTTCGAGGACAGCTTACCGAAAAGGCAGATGTTTATAGTTTTGGAGTGCTGATACTCGAGATCGTCTGCGGTAGACGAAACAGTTCCTTCACAGAGAACTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGGGAGATTAAGTGAAGCCATTGACTCATGCTTGAACAAGGATTACCCTGCAAAGGAAGCCATGGATGTTCTGCAAATAGGGCTGCTATGCACACAAGCTCTAGCTTCTTTAAGACCGTCAATGGCGACGGTGGTGAAACTGCTAAGCAGTGAAGGAGAGAGGAAGGTTTCCATCCCAGAACAACCTCCATTTTTGAATCCCTGTGGAGCCTCCAGAAGATCTTGTAGAGTCAGCAGCTTGGTTTCCAAACTTGAAGTTTCTTCTGGCACATCAACAGATTCAGGTTCTTCTTCTTCTTCTAACTTGCCTTCAAGAACTGGAGATTTGACTGAATTGAATCCAAACTAA 1971 45.81 MASIFIHGVSFFFFFFFLFFSVSLSDPRISEAGSICGTFKPPPKSRFIPTFIEEMEAISELLTTRNWTTHFVNSTPPMFALSQCFNDLSHNDCLLCYAASRTALPRCLPAVSARIFLDGCFLRYDNYSFYKESTDSLRDSVNCTSELGEIDESDKLGFGENVRVVVENVTRTAMANGGFGIGEVNGLFGLAQCWGSVEPEGCRACLEKARRSIRSCLPSREGRALNAGCYLRYSTVKFFNDKAEQQDHDDQNGFSGRRAVAAIVLASVASLIIAISAAFACYTRISNLKKEKKKQSLIPISFRDSDVNFKYETLEKATNYFGPSSKIGQGGAGSVYKGTLPNGQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVTLLGCSIEGPESLLVYEYVPNRSLDQFIFDKNKVQILNWKQRFNIILGTAEGLAHLHEGCKMRIIHRDIKSSNVLLDENFNPKIADFGLARHFAADQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSGRLSEAIDSCLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATVVKLLSSEGERKVSIPEQPPFLNPCGASRRSCRVSSLVSKLEVSSGTSTDSGSSSSSNLPSRTGDLTELNPN 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3463304 3466467 + CmoCh14G006770.1 Cmo14g00677 395943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00677 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 16 641 - -
Cmo14g00677 656 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 641 - -
Cmo14g00677 656 Pfam Protein kinase domain 324 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00677 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Cmo14g00677 656 MobiDBLite consensus disorder prediction 626 656 - -
Cmo14g00677 656 Gene3D Phosphorylase Kinase; domain 1 281 396 - -
Cmo14g00677 656 ProSiteProfiles Protein kinase domain profile. 321 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00677 656 CDD STKc_IRAK 327 589 - -
Cmo14g00677 656 ProSiteProfiles Gnk2-homologous domain profile. 138 238 IPR002902 -
Cmo14g00677 656 SUPERFAMILY Protein kinase-like (PK-like) 297 589 IPR011009 -
Cmo14g00677 656 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Cmo14g00677 656 Pfam Salt stress response/antifungal 70 127 IPR002902 -
Cmo14g00677 656 Pfam Salt stress response/antifungal 153 235 IPR002902 -
Cmo14g00677 656 SMART serkin_6 321 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00677 656 Gene3D Transferase(Phosphotransferase) domain 1 397 601 - -
Cmo14g00677 656 Gene3D - 42 129 IPR038408 -
Cmo14g00677 656 Gene3D - 145 238 IPR038408 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo12g00019 Cmo-Chr12:116551 Cmo14g00677 Cmo-Chr14:3463304 5.66E-142 dispersed
Cmo14g00677 Cmo-Chr14:3463304 Cmo03g00536 Cmo-Chr3:5440855 2.00E-106 dispersed
Cmo16g00411 Cmo-Chr16:1896063 Cmo14g00677 Cmo-Chr14:3463304 9.37E-79 dispersed
Cmo14g00677 Cmo-Chr14:3463304 Cmo18g00787 Cmo-Chr18:9409551 0 wgd
Cmo14g00677 Cmo-Chr14:3463304 Cmo05g00039 Cmo-Chr5:147272 1.23E-162 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74834 PF00069 Pkinase 4.80E-46 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00677 - - csv:101218775 1079.32