Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00690 ATGGAGCCACTTGCTGATGGTATGAGTTCTTTACTGAAAAATCAGAACCCGACATCTGCATCAAGGATTCTTGATTCCTCTAAACCGTCGAAGAATGAAGCAACTTCTTCGACTTCCTGTGTTATGTCTCAAAATTGTGCCAAGAAACCAATTCGCCATCCAAATGGTTCTTCTGTAAGTAGTAAAAAACATCCTGCCAATTTGAACCAAGATGTGCAGCTTGAAGATTTAGCTGATGTGAAAAAACATACACATGTTTCGAATAAGGGGAAATCCGAGCTTGTGAAGCCTATTATCGACGATTCTAAGGATTGTTGTTCAAATGGCTTGGAAGAATCTGGAAATCAAGTATTGAACGCATCAAAAGGAGCTGCCACACAAATAAATGACCAACAAAAGTCTCAGCCAGCTGAATTATCTTGTCCAAGTCCTCAGGCCAGCATATATTCCACGACTTTATATGCAGAGGCCAAACAAAGTTTCTCAAACACAGAAGTGAGTGAATGTGCAAGCAGCATTGACAAGTCTTGTGAAAGCATTAACATCACAAGTTCCTATGATATTGACAAAAGCAGGAAAACGAGTGTGTACCGAGGCAGCACTGGCAGTGATATCAGTGATGAGAGCAACTCGAGTAGTTTAAGCAATGCCATGTCTAAGCCCCATCAGGCAAATGACACAAGATGGGAAGCATTACAAGTCGTGAGATCCCATGATGGGATGTTAGGATTGAACCATTTCCGGTTGCTTCGAAGACTGGGATGTGGCGATATTGGTAGCGTCTATCTTTCGGAGTTAACTGGTACCAAGACTTACTTTGCCATGAAGGTTATGGATAAGGCTGCTTTGGCAAGTAGGAAGAAGCTTCTGAGGGCTCAGACTGAACGTGAGATATTGCAATCTCTGGATCATCCATTCCTGCCAACTTTGTATACACATTTCGAGACAGAGAAGTTCTCTTGTTTGGTAATGGAGTTTTGCCCCGGGGGCGACTTGCACGCGCTTCGGCAGAGACAACCTGGGAAATATTTTCCTGAGCATGCTGCAAGGTCTGAATTATTCTATGTGGCTGAAGTTCTCCTTGCTTTGGAGTATCTACACATGCTTGGGATAATCTACAGGGACCTAAAACCTGAAAATGTGTTAGTGAGAGATGATGGACACATAATGCTATCTGATTTTGACCTCTCTCTTAGATGTGCGGTCTCCCCGACCCTTGTTAAATCATCGAACTCGGGTTTAGAAGCTAAAAGTTCAGGATACTGTGTCCAGCCTGCTTGCATTGAGCCAACTTGCATAATGCAGCCAGATTGTATCCAGCCAGCATGTTTTACGCCTCGATTCTTTAGCAGACACAGGAAAGAAAAGAAGTCGAAACCGAAACCGAAAAGTGAAGTATATCATCAAGTGAGCCCTCTACCGGAGCTAATTGCAGAACCGACAAGTGCGAGATCGATGTCTTTTGTTGGTACACATGAGTACCTGGCACCTGAAATCATAAAAGGTGAAGGCCATGGCAGTGCTGTGGATTGGTGGACTTTTGGGATCTTTCTTTACGAGCTTTTGTTCGGTAGAACTCCGTTCAAGGGGGCAGGGAACCGTGCTACATTATTTAACGTGGTTGGTCAGCCATTGAGATTTCCAGAGTCTCCTTCTGTGAGCTTTGCAGCAAGGGATTTGATCCGAGGTTTGCTTGTAAAAGAACCACAACATCGTCTCGCTTATAGACGAGGTGCTACCGAGATCAAGCAACATCCATTCTTCCAAAGCGTGAATTGGGCACTCATCCGCTGCGCCAATCCTCCAGAGGTACCAAGAATGGATGTCATTGATTTCTCTTCAAAAATGGGGACACCACACGCCGCTGCAGCCGCAGCCGCAGCAGCAACAGGCGAAAAGATGCCGGGAGTCGACGTGAAGCCTGAAGGTAACTATTTAGAGATTGACTTCTTTTGA 1956 44.68 MEPLADGMSSLLKNQNPTSASRILDSSKPSKNEATSSTSCVMSQNCAKKPIRHPNGSSVSSKKHPANLNQDVQLEDLADVKKHTHVSNKGKSELVKPIIDDSKDCCSNGLEESGNQVLNASKGAATQINDQQKSQPAELSCPSPQASIYSTTLYAEAKQSFSNTEVSECASSIDKSCESINITSSYDIDKSRKTSVYRGSTGSDISDESNSSSLSNAMSKPHQANDTRWEALQVVRSHDGMLGLNHFRLLRRLGCGDIGSVYLSELTGTKTYFAMKVMDKAALASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHALRQRQPGKYFPEHAARSELFYVAEVLLALEYLHMLGIIYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSNSGLEAKSSGYCVQPACIEPTCIMQPDCIQPACFTPRFFSRHRKEKKSKPKPKSEVYHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGAGNRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSVNWALIRCANPPEVPRMDVIDFSSKMGTPHAAAAAAAAATGEKMPGVDVKPEGNYLEIDFF 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3558241 3561007 + CmoCh14G006900.1 Cmo14g00690 395956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00690 651 MobiDBLite consensus disorder prediction 1 67 - -
Cmo14g00690 651 ProSiteProfiles Protein kinase domain profile. 247 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00690 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
Cmo14g00690 651 PANTHER FLIPPASE KINASE 1-RELATED 37 651 - -
Cmo14g00690 651 CDD STKc_phototropin_like 246 611 - -
Cmo14g00690 651 Pfam Protein kinase domain 248 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00690 651 Pfam Protein kinase domain 485 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00690 651 MobiDBLite consensus disorder prediction 9 67 - -
Cmo14g00690 651 MobiDBLite consensus disorder prediction 195 225 - -
Cmo14g00690 651 SUPERFAMILY Protein kinase-like (PK-like) 221 611 IPR011009 -
Cmo14g00690 651 SMART serkin_6 247 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00690 651 Gene3D Transferase(Phosphotransferase) domain 1 483 606 - -
Cmo14g00690 651 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 37 651 - -
Cmo14g00690 651 MobiDBLite consensus disorder prediction 195 223 - -
Cmo14g00690 651 Gene3D Phosphorylase Kinase; domain 1 245 330 - -
Cmo14g00690 651 Gene3D Transferase(Phosphotransferase) domain 1 331 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g00624 Cmo-Chr3:5785792 Cmo14g00690 Cmo-Chr14:3558241 0 dispersed
Cmo14g00690 Cmo-Chr14:3558241 Cmo18g00610 Cmo-Chr18:7402842 0 dispersed
Cmo11g01662 Cmo-Chr11:11792207 Cmo14g00690 Cmo-Chr14:3558241 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74836 PF00069 Pkinase 1.90E-33 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00690 K08286 - csv:101219962 1115.91