Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00744 ATGGATCCTAAGACCTCATCAGCAACAAAGCAGCCCCAAGAAGTGGTACCCAACTTTTTGAAGCTCCCACAAGAACAGCAACAAGAACAAGAACAAGAACAACGACAATCAATCATGGGTGAAAACAAACCAGCTGAAATCAAGGATTTCCAAATAGCAGTGGCAGAGAAAGAAGAGGGCAAAAAACAGTTAGCACCGAAAAGAAGCTCCAACAAAGACCGTCATACCAAAGTGGAAGGCAGAGGGCGAAGAATCCGGATGCCAGCTCTATGTGCGGCCAGGATTTTTCAATTAACCAGAGAATTGGGTCATAAATCTGACGGCGAGACCATTCAGTGGCTGCTACAGCAGGCGGAGCCGTCGATAATCGCCGTTACTGGCACTGGAACAATCCCAGCTTCTGCTCTTGCAGCGGCGGCGGGTTCCGTTTCGCAACAGGGGGCTTCTCTTTCCGCCGGATTGCACCAAAAATTGGAGGAATTTGGTGGTGGGGGGTCCAGTAGGGCCAATTGGGGCAATTTGGGGCGACCCCATTTGGCCGCCACAGCAACAACAGGGCTTTGGCCCTCATCTGTCAGTGGCTTTGGGTATCAGTCTTCAACAGCAGCTGCTGCTGCTGCTGCTGCTCAATCAGCCACTAATTTAGCTAATGAAACTTCAAATTACTTTCACAAACTTGGGTTCCCTCCCTTTGACTTAACCTCCACCAACATGGGTCCTATGAGTTTCACCTCCATTTTAGGTGGAAACGCCCAACAATTACCTGGTTTGGAGCTTGGATTGTCTCAAGATGGTCATATTGGGGTCATAAATCCTCAAACACTGAACCAGATTTACCAACAGATGGGTCAAGCTAGAGTTCATCAGCATCATCATCAACACCAGCAGCAGCAACAACAACAACAACCTCCTGCCAAGGATGATTCTCAAGATTCAGGCTAG 942 48.62 MDPKTSSATKQPQEVVPNFLKLPQEQQQEQEQEQRQSIMGENKPAEIKDFQIAVAEKEEGKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAVTGTGTIPASALAAAAGSVSQQGASLSAGLHQKLEEFGGGGSSRANWGNLGRPHLAATATTGLWPSSVSGFGYQSSTAAAAAAAAQSATNLANETSNYFHKLGFPPFDLTSTNMGPMSFTSILGGNAQQLPGLELGLSQDGHIGVINPQTLNQIYQQMGQARVHQHHHQHQQQQQQQQPPAKDDSQDSG 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 3809147 3810088 + CmoCh14G007440.1 Cmo14g00744 396010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00744 313 MobiDBLite consensus disorder prediction 294 313 - -
Cmo14g00744 313 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
Cmo14g00744 313 MobiDBLite consensus disorder prediction 50 81 - -
Cmo14g00744 313 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 41 312 - -
Cmo14g00744 313 MobiDBLite consensus disorder prediction 1 81 - -
Cmo14g00744 313 MobiDBLite consensus disorder prediction 282 313 - -
Cmo14g00744 313 MobiDBLite consensus disorder prediction 1 39 - -
Cmo14g00744 313 Pfam TCP family transcription factor 70 199 IPR017887 -
Cmo14g00744 313 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 41 312 IPR005333 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo08g00005 Cmo-Chr8:30932 Cmo14g00744 Cmo-Chr14:3809147 6.84E-73 dispersed
Cmo14g00744 Cmo-Chr14:3809147 Cmo17g01372 Cmo-Chr17:10656012 3.69E-68 dispersed
Cmo11g01602 Cmo-Chr11:11466057 Cmo14g00744 Cmo-Chr14:3809147 2.47E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10975 PF03634 TCP 1.10E-30 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00744 - - cpep:111791513 548.895