Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00789 ATGGAGCAAGGATCTGGATTCGCCACTTCTTCCATCCATTCTCAGTTTTCGCGGGCATACCTTACAAGGAATCTAATACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCACCCCTCTACGTTTACTCAAGTATATTTGATGAGAAGTTGCGAAAATATCGAACTGAGGAAGTTGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTGTACGCTGATACCATTATTGAAATATGTCTTCATTGTATTGAGCGCGGATGACAATGGCGAAGGTATGGGTTGGATTGCGGAACTTAGCTCATTCACTTATGTTCTTTTTTGCTCCATCTGTTCTCTGGCTTCAGGAGGAATCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGCTTACTTCCTAACCAACAAGCAGCTGATGAGGAGCTCTCAGCTTACAAATATGGCCCATCTTCTCCTGCAGTAGCCCCTTCTCAACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGATTTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTGACTCCTGCAATTTCAGGTTTGGTATTTACTATTTGTCGTAAGCGTAAGATTCATAAGGACCCCATAGTTCTATCCGCAATTTCAGGCTTACAATTTACTGAAGCAAAATTGACCAATGGGGAACTCCTTTTGATAGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATATTTGCTCCAATAGTTATCATCTGGTTGTTGTCGATTTTCTCCGTTGGTCTGTACAACGTAATTCATTGGAACCCAAGAATTATATGTGCAATTTCCCCGCATTATATTATCAAGTTCTTAAGAGTTACTGGTAAAGATGGTTGGCTTTCTCTCGGTGGGGTTCTTCTGGCCATAGCTGGCACTGAGGCGATGTTTGCAGATCTTGGTCATTTCACTGCTTTGTCGATAAGGCTTGCATTTGCATTTGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTTTCTAAGAACCTTGATTTGTTTCCAAACAGTTTTTACGACTCGATACCTGAACCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCGGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTGAAAGTTGTCCACACCTCTAAACACATATATGGGCAGGTCTACATCCCAGAAATAAACTGGATATTAATGATCTTCACTCTTTCCGTTACAATAGGGTTTCAAGATACGAGACTGATTGGAAATGCTTATGGACTTGCCTGTATGGCAGTTATGTTCACGACTACATTTCTTATGGCACTTGTCATTATATTCGTTTGGCAAAAAAGTATCCTCCTGGCCGCACCTTTTCTCATCTTCTTCTGGTCTGTTGAGGCAGCATACTTATCTGCAGCAATCATAAAAGTGCCTGAAGGAGGGTGGGTCCCGCTTGTGCTGTCAGCCATTTTTATGATTGTTATGTTTGTCTGGCATTATGGCACTCGCAAGAAGTACTACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTGGGTATAGTTCGTGTCCCTGGGATTGGTCTCATATACTCAGAATTGGCAACAGGAGTTCCCGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCGTTTCACAAAGTTTTAGTCTTTGTGTGTGTAAAATCTGTTCCCGTTCCATATGTCTCGCCCGAAGAACGTTTTCTCATCGGGAGAGTCTGTCCTAGGCCGTATCGCATGTACCGATGCATAGTGAGGTATGGCTACAAGGACATTCAGAAGGATGATGGAAACTTTGAGAATCAACTGATGCTAAACATTGCGGAATTTATTCAAATGGAAGCAGAGGAGCCACAATTCTCAAGCTCTGAAAGTAGTACAGTTGATGGGAGGATGGCAGTAATAAGCACTCGGAGTATACAATCAAGCTTGAGCTTAATAGTATCGGGTCATGAAGAAGTTGGTACAAGCAACTCCATCTATAGTAGCAAATCTGCCACGCTCCAAAGCTTACGATCTGTCTATGAGGATGAGAATCCAATACTAAGAAGGCGCCATGTGAGGTTTCAATTATCTCCCAGCCCTTCAATGGACCCCAGAGTTAGAGAAGAGTTGATGGACTTGATCCAAGCCAAAGACGCCGGTGTAGCATATATAATGGGACACTCATATGTGAAGGCCAGAAGATCTTCATCTTATTTGAAAAAGCTCGTGATAGATATCGGATACTCGTTCCTTCGAAAGAACTGCCGAGGACCGTCTGTTGCACTCAATATCCCCCACATCAGTCTGATCGAAGTGGGGATGATATATTATGTTTAG 2478 42.66 MEQGSGFATSSIHSQFSRAYLTRNLILAYQSFGVVYGDLSTSPLYVYSSIFDEKLRKYRTEEVVFGAFSLIFWTCTLIPLLKYVFIVLSADDNGEGMGWIAELSSFTYVLFCSICSLASGGIFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSSPAVAPSQLKRFLERHKTLRTILLLVVLFGACMVIGDGVLTPAISGLVFTICRKRKIHKDPIVLSAISGLQFTEAKLTNGELLLIACAILVGLFALQHCGTHKVAFIFAPIVIIWLLSIFSVGLYNVIHWNPRIICAISPHYIIKFLRVTGKDGWLSLGGVLLAIAGTEAMFADLGHFTALSIRLAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQVYIPEINWILMIFTLSVTIGFQDTRLIGNAYGLACMAVMFTTTFLMALVIIFVWQKSILLAAPFLIFFWSVEAAYLSAAIIKVPEGGWVPLVLSAIFMIVMFVWHYGTRKKYYFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGNFENQLMLNIAEFIQMEAEEPQFSSSESSTVDGRMAVISTRSIQSSLSLIVSGHEEVGTSNSIYSSKSATLQSLRSVYEDENPILRRRHVRFQLSPSPSMDPRVREELMDLIQAKDAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4026143 4034428 + CmoCh14G007890.1 Cmo14g00789 396055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00789 825 PANTHER POTASSIUM TRANSPORTER 4 116 825 - -
Cmo14g00789 825 TIGRFAM kup: potassium uptake protein 105 825 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g00789 825 Pfam K+ potassium transporter 29 643 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g00789 825 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 98 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cmo14g00789 825 PANTHER POTASSIUM TRANSPORTER 4 20 98 - -
Cmo14g00789 825 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 116 825 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo11g01562 Cmo14g00789 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01702 Cmo-Chr11:12075480 Cmo14g00789 Cmo-Chr14:4026143 0 dispersed
Cmo14g00647 Cmo-Chr14:3259642 Cmo14g00789 Cmo-Chr14:4026143 0 dispersed
Cmo14g00789 Cmo-Chr14:4026143 Cmo04g02846 Cmo-Chr4:20324007 0 dispersed
Cmo11g01562 Cmo-Chr11:11227075 Cmo14g00789 Cmo-Chr14:4026143 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00789 K03549 - csv:101208973 1419.45