Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00833 ATGAAGCAAGACAACACTCATCAATCCCCAAACCCCGCCGCCGCCGAGACCGAGAAATTGGCGGTCGGTGACCAGGACGAAGACAAGCTTCTAGCTGCTCTAGGCTATAATGTCCGGTCGTCGGACATGTCTGATGTAGCTCTGAAAATAGAACAGCTTGAAATGGTGATGGGTTTATCCGAACATGATGGAATTTCTCATCTCTCTTCCAATACAATCCATTATAATCCCTCCGATATGTCTTCTTGGATTGAAACCATGATTGAGGAACTCAATAACCCTGTTCATGCCGGAGATGAATCCATTCCCGCCATCGCCACCACTGCCGCCTTCACCGATGACTCTGAGTACGATCTTCGAGTAATTCCGGGCATTGCCGCTTTCCCTCAACTTAATTCCACCAGCACCAGACAGCGATATAAGAACTCCGATTGCGAATCGGTTCTTGTTAAGGCACCGTCGTTCTCGGAGCCGTCGCGCTCGGTGGTTCTGGTGGATTCTGCTGAGACCGGCGTCCATTTGGTCCATAGCCTCCTTGCCTGCGCCGATGCCGTCAGTAAAAACAACCTTAACCTCGCCGAAGCTATACTCAAACATATCAAAATCCTCGTCGACGTTCAGACCGGCGCTGTAAGAAAAGTCGCCGGGTTTTTCGCCCAAGCCCTGACTTACCGGATTTACCGATTCTACCCATTGAAGCCCTTCGATTGTTCATCTTCATACACCGATCAACTCCAAATCCATTTCTATGAATCTTGCCCTTATCTGAAATTTGCCCATTTCACTGCCAATCAAGCCATTCTGGAATCCATCGGATTATCCGGTTCTGTCCACGTCATCGATTTCAACCTCCAGCAAGGTCTCCAATGGCCGCCGTTGATTCAGGCCCTCGCACTCCGTCCAGGTGGACCTCCGGCGTTTTATCTCACTGGAATCAGCTCCCCGCCGGGCGACGGATTACAGAAAGCGGGTACGAAATTGGCCAATTTCGCGGAGAAATTCGGCGTTAAATTCGAATTCCGTGGTTTCTACTGTAAAAATTTCGGCGATCTCGAACCGTTCATGCTCGATTTAGAAGCGGAAACCGTGGCTATAAATTCCATTTTCGAGCTCCACCGGCTACTGGCTTATCCAGGCGCGATTCAAAAAGCTCTAACCACAATCAAAGCTCTGAACCCGAAAATCATCACTCTGGTGGAGCAGGTCGCGAACCACAATGGGCCATCGTTCATGGAACGATTCACAGAAGCACTACACTATTACTCGAGCTTATTCGATGCGCTTGAAGAAGCGTCGGCCGTTGGGTCGTTGGATGTGGTGAGGTCGGAGGAGTATTTAGGGAGACAAATCTGCAACGTGGTGGGATGTGAAGGTACCGATCGGGTCGAGCGGCATGAAACGGTGGCGCAGTGGCTGAGCCGAATGCAGTCGAGTGGGTTCGAGATGATTCATCTGGGTTCAAACGCGTTCAAGCAGGCGAATACTCTGCTGTCGGCTCTGTTCCATGGAAGAAACGGGTACAAAGTTGAAGAGAATAACGGGAGTTTGACGTTGGGTTGGCACACTCGCCCGCTCATCGCCACCTCTGCCTGGACTGTCCCCGTCGCCAGCGGCAGCGGCACCGGCGGGCCGAAGTGA 1638 51.47 MKQDNTHQSPNPAAAETEKLAVGDQDEDKLLAALGYNVRSSDMSDVALKIEQLEMVMGLSEHDGISHLSSNTIHYNPSDMSSWIETMIEELNNPVHAGDESIPAIATTAAFTDDSEYDLRVIPGIAAFPQLNSTSTRQRYKNSDCESVLVKAPSFSEPSRSVVLVDSAETGVHLVHSLLACADAVSKNNLNLAEAILKHIKILVDVQTGAVRKVAGFFAQALTYRIYRFYPLKPFDCSSSYTDQLQIHFYESCPYLKFAHFTANQAILESIGLSGSVHVIDFNLQQGLQWPPLIQALALRPGGPPAFYLTGISSPPGDGLQKAGTKLANFAEKFGVKFEFRGFYCKNFGDLEPFMLDLEAETVAINSIFELHRLLAYPGAIQKALTTIKALNPKIITLVEQVANHNGPSFMERFTEALHYYSSLFDALEEASAVGSLDVVRSEEYLGRQICNVVGCEGTDRVERHETVAQWLSRMQSSGFEMIHLGSNAFKQANTLLSALFHGRNGYKVEENNGSLTLGWHTRPLIATSAWTVPVASGSGTGGPK 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4320155 4321792 - CmoCh14G008330.1 Cmo14g00833 396099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00833 545 PANTHER DELLA PROTEIN RGL1 25 532 IPR030006 GO:0003712|GO:0005634
Cmo14g00833 545 SMART DELLA_2 28 101 - -
Cmo14g00833 545 Gene3D - 26 91 IPR038088 -
Cmo14g00833 545 Pfam Transcriptional regulator DELLA protein N terminal 28 94 IPR021914 -
Cmo14g00833 545 MobiDBLite consensus disorder prediction 1 22 - -
Cmo14g00833 545 Pfam GRAS domain family 174 532 IPR005202 -
Cmo14g00833 545 ProSiteProfiles GRAS family profile. 165 532 IPR005202 -
Cmo14g00833 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 532 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00833 Cmo-Chr14:4320155 Cmo15g00767 Cmo-Chr15:3765077 0 dispersed
Cmo01g00394 Cmo-Chr1:1945242 Cmo14g00833 Cmo-Chr14:4320155 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
10985 PF03514 GRAS 2.60E-115 CL0063 Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00833 K14494 - csv:101203095 779.245