Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00834 ATGGCGACGCTAATGTCGGGCTCCAGAGTTCAACCAGCAGCTTGTGTTGTTCTTTCCTCCTCCATCAAGCACCATCTGGGTTTTAATTCCCTTCGTCGTTCCAATTGCTCCTTCTCTCATTTTCACCATTCCTCCTTCTCCTTCAGGCGCTCTGGAGCTAGACGAGCTCTCTCTGTTTCCATGTCCGTTAGCCCTCTTGAAGCCTGTGTTAAAGCTTCCATTACCGTTCCCAACAAGCTCGGCGACTGCCCTTTTTGCCAAAGAGTATTACTGACTTTGGAGGAAAAGCGTCTACCCTATGACCTAAAGTTGGTAGACCTGTCAAACAAGCCAGAATGGTTCTTAGAAATAAGTTCAGAGGGGAAAGTTCCCGTTGTTAAATTTGATGAACAGTGGGTTGCAGATTCAGATGTTATAACACAAACACTGGAAGAGAAGTACCCAAACCCACCTTTAGCGACCCCTCCCGATAAATCTTCAGTAGGATCAAAGATTTTCTCCACGTTTATTGCTTTTCTAAAGAGCAAGGATCCTAATGATGGAACAGAACAAGCATTACTTAGCGAGCTGAGTTCTTTCGATTCTCACATCAAAGAGAATGGCCCTTTTATCAATGGGAAAGAGATTTCTGCAGCAGACCTGTCACTTGGTCCAAAGTTGTACCATTTAGAAATTGCATTGGGTCACTATAAGAACTGGTCAGTCCCAGACAGCCTACCCTACGTTAAGTCTTACATGAAGCAGAGCATATTTTCAAGAGAATCATTTGCAAAAACTCGTGCCCTTCCTGAGGATGTTATTGCTGGTTGGCGTCCAAAGGTCTTAGGTTAA 831 44.4 MATLMSGSRVQPAACVVLSSSIKHHLGFNSLRRSNCSFSHFHHSSFSFRRSGARRALSVSMSVSPLEACVKASITVPNKLGDCPFCQRVLLTLEEKRLPYDLKLVDLSNKPEWFLEISSEGKVPVVKFDEQWVADSDVITQTLEEKYPNPPLATPPDKSSVGSKIFSTFIAFLKSKDPNDGTEQALLSELSSFDSHIKENGPFINGKEISAADLSLGPKLYHLEIALGHYKNWSVPDSLPYVKSYMKQSIFSRESFAKTRALPEDVIAGWRPKVLG 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4326528 4330719 + CmoCh14G008340.1 Cmo14g00834 396100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00834 276 SUPERFAMILY GST C-terminal domain-like 146 273 IPR036282 -
Cmo14g00834 276 PANTHER GLUTATHIONE S-TRANSFERASE DHAR3, CHLOROPLASTIC 5 275 - -
Cmo14g00834 276 Gene3D Glutaredoxin 65 152 - -
Cmo14g00834 276 CDD GST_C_DHAR 152 273 - -
Cmo14g00834 276 SFLD Glutathione Transferase (cytosolic) 82 247 IPR040079 -
Cmo14g00834 276 CDD GST_N_family 83 144 - -
Cmo14g00834 276 SFLD Main (cytGST) 82 247 - -
Cmo14g00834 276 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 5 275 IPR044627 GO:0033355|GO:0045174|GO:0098869
Cmo14g00834 276 Gene3D - 153 275 - -
Cmo14g00834 276 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 73 151 IPR004045 -
Cmo14g00834 276 Pfam Glutathione S-transferase, N-terminal domain 82 151 IPR004045 -
Cmo14g00834 276 SUPERFAMILY Thioredoxin-like 81 150 IPR036249 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g00242 Cmo-Chr4:1210152 Cmo14g00834 Cmo-Chr14:4326528 1.84E-86 dispersed
Cmo14g00834 Cmo-Chr14:4326528 Cmo04g01303 Cmo-Chr4:6614561 2.16E-06 dispersed
Cmo14g00834 Cmo-Chr14:4326528 Cmo04g01285 Cmo-Chr4:6518889 9.56E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00834 K21888 - csv:101203335 466.463