Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00844 ATGGAGTTCCCCAATGGATTCCTACGACGAATTTTAGCGGCGGCGCTTCTGGGTTTGCCCTTTTTGGGTTCTGTTCTGGCGGATCTGGCTTCCGACAGGGCGGCGCTGGTGGGTTTCCGCGCGGCGATGGGTGGTCGGCCCCGATTAGAGTGGAATATCTCCGAGGTATCTCCCTGTTCTTGGGCTGGTGTTAGCTGTGGTAAGAATGGGGTTTTTGAGCTCCGGCTTCCGGCTATGGGGCTTTCCGGTGAACTTCCGGTGGGGCTTGGGAATTTGACGCAGTTACAAACTCTGTCTCTGCGGTTTAATGCTCTGTCTGGACGGATTCCGGCGGATTTTGCGAATCTTCGTGGGTTGAGGAATCTTTACTTGCAGGGGAATTTGTTTTCCGGCGAGATTCCGGCGTTTCTGTTCGATTTGAAGAATCTGGTTCGGTTGAACATGGCGGACAATAATTTTTCAGGGGAGATTTCATCTGGGTTCAACAATTTGTCCCGTTTGGCTACTCTGTATTTACAGAACAATCAGTTCACCGGAGTGGTTCCTGAGTTAAATCTTCATCTTGAACAATTTAATGTCTCGTTTAATCGATTGAACGGTTCGATTCCGTCGAAGCTCTCTGGTTTTCCAGCGAGTGTTTTTGAGGGAAATTTGCTCTGTGGGGCGCCATTGTTGCTCTGCAACTCGACGGAGACGACCGAGCCAGGTCGAAAGTCGAAGCTCTCGGGTGGGACGATTGCCGGAATTGTGATAGGAGGTTTGTTTGTTTTGGTATTGATTTTGGTTGTTTTGATTCTTGTGTGTCAAAGAAAGAGGAAGGGGAAATTGGAGTCGAATGAGGGGGTTCGGTCGGCCGGTGAGGTTGAGGCGCCGGGGGAGAAGGCGGCGACAGTGGAAGGGAGTAGCGAAAGTATAAACATAGATCATTTAATGGCACCGAAATCGGTAGGGAAGGGCGGCGAGAGAGATAAGAGATTGGTGTTCTTTGGGAATGTGGGGAATGTGTTTGATTTGGAGGATTTGTTGAGGGCGTCTGCGGAGGTTCTCGGGAAGGGGACGTTCGGGACGGCGTATAAGGCGACGCTGGAGACAGGGATGGTGGTTGCTGTGAAGCGGTTGAAGGAGATGACGGCGGCGGAGAAGGAGTTCAGGGAGAAGATCGAGGAGGTGGGGAGAATGAAGCATGAGAATTTGGTCCCTCTCCGAGCTTATTATTACAGCAGAGAGGAAAAGCTTTTAGTTTATGATTACATGCTGATGGGAAGCTTATCTGCACTTCTACACGGTAGTAGTAGAGAGTCGGGAAGGACTCCGTTGAATTGGGAAGCAAGGTGTGGCATAGCGCTTGGAGTAAGCCACGGGATTCATTACCTTCATTCTCAAGGCCCAACCATCTCTCACGGCAACATCAAGTCCTCAAACATTCTCCTCACCCAATCATACGAAGCACGCGTATCTGACTTCGGCCTCGCACAGCTAGCCATGTCTCCTTCCGCTCCAAGTCGTGTCGCTGGGTACCGAGCCCCAGAGGTCACCGATTCTCGAAAAGTATCACAAAAAGCAGATATTTACAGCTTCGGAGTGCTATTATTAGAGATGCTAACAGGAAAACCCCCTACACATTCAATCTTCAATGACGAAGCGGTGGACCTTCCAAGATGGGTCCAGTCAGTAGTTCAAGAGGAATGGACAGCTGAAGTGTTTGATGAACAACTTCTTAGGTACCAAAATGTCGAGGAGGAGATGGTTCAACTCTTGGAACTCGCTTTGCAATGCACAGTCCCGTATCCCGACAACCGTCCAGAAATGGATGAGATCGTTCGACGAATCGAAGAACTCTGTCTATCGTCATCACAAAAACAGAACGAGGGCATCGACAATGATGAAAGTAATGGTATTTCTACGCCGTCAAATTCTGCTCGATAA 1926 49.69 MEFPNGFLRRILAAALLGLPFLGSVLADLASDRAALVGFRAAMGGRPRLEWNISEVSPCSWAGVSCGKNGVFELRLPAMGLSGELPVGLGNLTQLQTLSLRFNALSGRIPADFANLRGLRNLYLQGNLFSGEIPAFLFDLKNLVRLNMADNNFSGEISSGFNNLSRLATLYLQNNQFTGVVPELNLHLEQFNVSFNRLNGSIPSKLSGFPASVFEGNLLCGAPLLLCNSTETTEPGRKSKLSGGTIAGIVIGGLFVLVLILVVLILVCQRKRKGKLESNEGVRSAGEVEAPGEKAATVEGSSESINIDHLMAPKSVGKGGERDKRLVFFGNVGNVFDLEDLLRASAEVLGKGTFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKIEEVGRMKHENLVPLRAYYYSREEKLLVYDYMLMGSLSALLHGSSRESGRTPLNWEARCGIALGVSHGIHYLHSQGPTISHGNIKSSNILLTQSYEARVSDFGLAQLAMSPSAPSRVAGYRAPEVTDSRKVSQKADIYSFGVLLLEMLTGKPPTHSIFNDEAVDLPRWVQSVVQEEWTAEVFDEQLLRYQNVEEEMVQLLELALQCTVPYPDNRPEMDEIVRRIEELCLSSSQKQNEGIDNDESNGISTPSNSAR 641
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 4442207 4444558 - CmoCh14G008440.1 Cmo14g00844 396110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00844 641 Gene3D Phosphorylase Kinase; domain 1 321 417 - -
Cmo14g00844 641 MobiDBLite consensus disorder prediction 618 641 - -
Cmo14g00844 641 SUPERFAMILY L domain-like 50 209 - -
Cmo14g00844 641 SUPERFAMILY Protein kinase-like (PK-like) 347 610 IPR011009 -
Cmo14g00844 641 Pfam Protein kinase domain 346 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00844 641 Gene3D Transferase(Phosphotransferase) domain 1 418 635 - -
Cmo14g00844 641 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Cmo14g00844 641 PANTHER OS05G0588300 PROTEIN 18 626 - -
Cmo14g00844 641 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Cmo14g00844 641 SMART LRR_typ_2 164 187 IPR003591 -
Cmo14g00844 641 SMART LRR_typ_2 92 115 IPR003591 -
Cmo14g00844 641 SMART LRR_typ_2 116 140 IPR003591 -
Cmo14g00844 641 CDD STKc_IRAK 349 613 - -
Cmo14g00844 641 ProSiteProfiles Protein kinase domain profile. 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00844 641 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Cmo14g00844 641 PANTHER INACTIVE RECEPTOR KINASE-RELATED 18 626 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo04g02382 Cmo-Chr4:17762523 Cmo14g00844 Cmo-Chr14:4442207 0 dispersed
Cmo13g01015 Cmo-Chr13:8615786 Cmo14g00844 Cmo-Chr14:4442207 0 dispersed
Cmo14g00844 Cmo-Chr14:4442207 Cmo15g00785 Cmo-Chr15:3859017 0 dispersed
Cmo15g00334 Cmo-Chr15:1546633 Cmo14g00844 Cmo-Chr14:4442207 1.40E-94 dispersed
Cmo14g00844 Cmo-Chr14:4442207 Cmo18g00062 Cmo-Chr18:402885 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74838 PF00069 Pkinase 3.50E-40 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00844 - - csv:101221942 1063.14