Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo14g00961 | ATGTCGGTGCTTGCGGCTTCCATCACCGCGGGTATATTGGAACAGGTCTCTTGCCGGTTTGCAAAGCAGTTCATTTTATTGTGGTTTGTGATTTCCATAACCAATGCCAATGTCCCCGATATACTACCAGGACCTTTGGTTGCACCCGCTACCAGTGCTATGCCTCTACCTGCAAAATTGCCTCTTCACCAATCCCACCACCGAAAATATATGTCACCACAGAGCGCGCCAATAGCTGGACTAGCACCAGCGTCTTCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCATAAGTTCAAGTTTTTCAAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGGTGGTAGCCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGCGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCAGAAGCGAGGAAGCGGTGATGACTGCCATTGTGTCTATCCCCTAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACTTTTTCTCGAAGAGTTAGCTTCGGAACTTCGTTTACAAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGGTTAAATATCTCAATGGACATTACTCCCCACTCTGGGATCAGCTTTTCTGCAGTTGATGTGACTGCAATAAACTCTTCACTTATAATGCACAAGGTTCGTCTAGACCCGACACAGGTTGGTGATTACAGTCTTCTCAATATTACCTGGTTTAAGCCTCCGCCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCAGTAGAAGCTCCAGCATATCATTTTCCAGCTTCAACATCACTCAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTCTTGGTATTGGCGCTGGTTTTCTGTTCCTTGCCATTCTATTTGTGTTGATAATTTGTTTATGCAAATCTCATCGTGGGAAAACTGCTGAAGCACCTCCATTAGTACCAGAAAAATCAAGGGTCACGGACAAAGCGCCTGGGGTAGGATCTTTCTCTCATCCATCTAGTATGAGATTTCTAACTTATGAAGAGCTTAAAGAAGCAACTCATAACTTTGAAGCAGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTATAAGGGTGTCTTAAGTGATGGCACAGCCGTTGCAATCAAGAGGCTTTCAAGTGGTGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGAAATCTCATCAAACTCGTTGGCTACTACTGTAACCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGGATGAAGATTGCACTGGATGCTGCTCGAGGGCTTGCTTACCTTCACGAAGACTCGCAACCGTGTGTGATACACCGAGACTTTAAGGCATCGAATATACTGCTCGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGGTATGTCGCCCCCGAGTATGCAATGACTGGCCATCTACTTATTAAAAGCGATGTTTATAGCTACGGAGTTGTACTTCTCGAGTTGCTTACCGGAAGGAAACCTGTAGATATGTCACAACCATCAGGTCAAGAGAACCTGGTCACGTGGGCGAGGCCGATTTTGAGAGACAAGGAACGGTTGGAAGAACTTCCTGATCCACGACTTGGAGGGAAGTATCCAAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCGGAGGCTGGCCAACGTCCGACAATGGGTGAAGTTGTACAGTCTCTTAAAATGGTGCAACGTGTGACAGAGTACCAAGACTCCATGGCGGTACCATCCTCCAACAACCGAACCAATCTTAGACAGTCGTCAACAACTTTCGAGTCCGATGGATCCTCTTCAGTGTTCTCTTCCGGACCTTATTCTGGTTTAAGCACTTTTGACAACGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA | 2175 | 46.67 | MSVLAASITAGILEQVSCRFAKQFILLWFVISITNANVPDILPGPLVAPATSAMPLPAKLPLHQSHHRKYMSPQSAPIAGLAPASSPYYGPLITSGHPPISSSFSKPLMKSGSAPPGGSLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVQKRGSGDDCHCVYPLKIDLLLLNVSQNPNWKLFLEELASELRLQVSQIELINFYVLSLSRLNISMDITPHSGISFSAVDVTAINSSLIMHKVRLDPTQVGDYSLLNITWFKPPPPSEAPLASASPVEAPAYHFPASTSLSSPSKGHHSNLTLLGIGAGFLFLAILFVLIICLCKSHRGKTAEAPPLVPEKSRVTDKAPGVGSFSHPSSMRFLTYEELKEATHNFEAASILGEGGFGRVYKGVLSDGTAVAIKRLSSGGQQGDKEFLVEVEMLSRLHHRNLIKLVGYYCNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLIKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKERLEELPDPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMAVPSSNNRTNLRQSSTTFESDGSSSVFSSGPYSGLSTFDNDNVSRTAIFSEDLHEGR | 724 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 5121609 | 5126972 | - | CmoCh14G009610.1 | Cmo14g00961 | 396227 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo14g00961 | 724 | Pfam | Protein kinase domain | 380 | 652 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Cmo14g00961 | 724 | Gene3D | Transferase(Phosphotransferase) domain 1 | 457 | 678 | - | - | |
| Cmo14g00961 | 724 | CDD | STKc_IRAK | 385 | 655 | - | - | |
| Cmo14g00961 | 724 | MobiDBLite | consensus disorder prediction | 336 | 356 | - | - | |
| Cmo14g00961 | 724 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 503 | 515 | IPR008271 | GO:0004672|GO:0006468 | |
| Cmo14g00961 | 724 | MobiDBLite | consensus disorder prediction | 665 | 695 | - | - | |
| Cmo14g00961 | 724 | ProSitePatterns | Protein kinases ATP-binding region signature. | 385 | 407 | IPR017441 | GO:0005524 | |
| Cmo14g00961 | 724 | PANTHER | OS01G0750732 PROTEIN | 26 | 724 | - | - | |
| Cmo14g00961 | 724 | SUPERFAMILY | Protein kinase-like (PK-like) | 354 | 656 | IPR011009 | - | |
| Cmo14g00961 | 724 | Gene3D | Phosphorylase Kinase; domain 1 | 345 | 456 | - | - | |
| Cmo14g00961 | 724 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 | 26 | 724 | - | - | |
| Cmo14g00961 | 724 | ProSiteProfiles | Protein kinase domain profile. | 379 | 657 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cmo01g00292 | Cmo14g00961 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo11g01976 | Cmo-Chr11:13587372 | Cmo14g00961 | Cmo-Chr14:5121609 | 1.15E-105 | dispersed | |
| Cmo14g00961 | Cmo-Chr14:5121609 | Cmo19g00148 | Cmo-Chr19:815151 | 2.46E-132 | dispersed | |
| Cmo01g00292 | Cmo-Chr1:1389479 | Cmo14g00961 | Cmo-Chr14:5121609 | 0 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 74839 | PF00069 | Pkinase | 5.50E-44 | CL0016 | Cmo | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo14g00961 | - | - | cpep:111790593 | 1365.9 |