Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00961 ATGTCGGTGCTTGCGGCTTCCATCACCGCGGGTATATTGGAACAGGTCTCTTGCCGGTTTGCAAAGCAGTTCATTTTATTGTGGTTTGTGATTTCCATAACCAATGCCAATGTCCCCGATATACTACCAGGACCTTTGGTTGCACCCGCTACCAGTGCTATGCCTCTACCTGCAAAATTGCCTCTTCACCAATCCCACCACCGAAAATATATGTCACCACAGAGCGCGCCAATAGCTGGACTAGCACCAGCGTCTTCTCCTTATTATGGGCCTCTTATCACTTCTGGTCACCCACCCATAAGTTCAAGTTTTTCAAAACCACTGATGAAGAGTGGATCAGCTCCTCCTGGTGGTAGCCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGCGCTATTCCCTCTGGCTTACCTCAGCCACCACTTTCCCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCAGAAGCGAGGAAGCGGTGATGACTGCCATTGTGTCTATCCCCTAAAAATTGATCTCCTCCTCTTGAATGTATCACAGAATCCTAATTGGAAACTTTTTCTCGAAGAGTTAGCTTCGGAACTTCGTTTACAAGTCTCTCAGATTGAGCTGATAAACTTTTATGTACTTAGTTTATCGAGGTTAAATATCTCAATGGACATTACTCCCCACTCTGGGATCAGCTTTTCTGCAGTTGATGTGACTGCAATAAACTCTTCACTTATAATGCACAAGGTTCGTCTAGACCCGACACAGGTTGGTGATTACAGTCTTCTCAATATTACCTGGTTTAAGCCTCCGCCTCCTTCTGAAGCTCCTCTAGCTTCTGCATCACCAGTAGAAGCTCCAGCATATCATTTTCCAGCTTCAACATCACTCAGTTCTCCTAGTAAAGGACACCATTCTAATCTGACACTTCTTGGTATTGGCGCTGGTTTTCTGTTCCTTGCCATTCTATTTGTGTTGATAATTTGTTTATGCAAATCTCATCGTGGGAAAACTGCTGAAGCACCTCCATTAGTACCAGAAAAATCAAGGGTCACGGACAAAGCGCCTGGGGTAGGATCTTTCTCTCATCCATCTAGTATGAGATTTCTAACTTATGAAGAGCTTAAAGAAGCAACTCATAACTTTGAAGCAGCAAGCATACTGGGGGAGGGTGGTTTTGGCAGGGTTTATAAGGGTGTCTTAAGTGATGGCACAGCCGTTGCAATCAAGAGGCTTTCAAGTGGTGGGCAACAAGGCGACAAGGAGTTTTTGGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGAAATCTCATCAAACTCGTTGGCTACTACTGTAACCGCGACTCTTCACAAAACCTGCTATGCTATGAACTTGTTCCAAATGGAAGCTTGGAGGCCTGGCTCCATGGTCCTTTGGGTGTTAATTGTCCTTTGGATTGGGACACCAGGATGAAGATTGCACTGGATGCTGCTCGAGGGCTTGCTTACCTTCACGAAGACTCGCAACCGTGTGTGATACACCGAGACTTTAAGGCATCGAATATACTGCTCGAGAACAACTTCCATGCCAAAGTTGCCGACTTCGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGCACATTTGGGTATGTCGCCCCCGAGTATGCAATGACTGGCCATCTACTTATTAAAAGCGATGTTTATAGCTACGGAGTTGTACTTCTCGAGTTGCTTACCGGAAGGAAACCTGTAGATATGTCACAACCATCAGGTCAAGAGAACCTGGTCACGTGGGCGAGGCCGATTTTGAGAGACAAGGAACGGTTGGAAGAACTTCCTGATCCACGACTTGGAGGGAAGTATCCAAAGGAAGATTTTGTGCGGGTGTGTACCATTGCTGCAGCCTGCGTCGCTCCGGAGGCTGGCCAACGTCCGACAATGGGTGAAGTTGTACAGTCTCTTAAAATGGTGCAACGTGTGACAGAGTACCAAGACTCCATGGCGGTACCATCCTCCAACAACCGAACCAATCTTAGACAGTCGTCAACAACTTTCGAGTCCGATGGATCCTCTTCAGTGTTCTCTTCCGGACCTTATTCTGGTTTAAGCACTTTTGACAACGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTTCACGAGGGACGATGA 2175 46.67 MSVLAASITAGILEQVSCRFAKQFILLWFVISITNANVPDILPGPLVAPATSAMPLPAKLPLHQSHHRKYMSPQSAPIAGLAPASSPYYGPLITSGHPPISSSFSKPLMKSGSAPPGGSLENIAPIQSSAGAIPSGLPQPPLSPNAADCCKPDMVQKRGSGDDCHCVYPLKIDLLLLNVSQNPNWKLFLEELASELRLQVSQIELINFYVLSLSRLNISMDITPHSGISFSAVDVTAINSSLIMHKVRLDPTQVGDYSLLNITWFKPPPPSEAPLASASPVEAPAYHFPASTSLSSPSKGHHSNLTLLGIGAGFLFLAILFVLIICLCKSHRGKTAEAPPLVPEKSRVTDKAPGVGSFSHPSSMRFLTYEELKEATHNFEAASILGEGGFGRVYKGVLSDGTAVAIKRLSSGGQQGDKEFLVEVEMLSRLHHRNLIKLVGYYCNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLIKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKERLEELPDPRLGGKYPKEDFVRVCTIAAACVAPEAGQRPTMGEVVQSLKMVQRVTEYQDSMAVPSSNNRTNLRQSSTTFESDGSSSVFSSGPYSGLSTFDNDNVSRTAIFSEDLHEGR 724
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 5121609 5126972 - CmoCh14G009610.1 Cmo14g00961 396227
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00961 724 Pfam Protein kinase domain 380 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g00961 724 Gene3D Transferase(Phosphotransferase) domain 1 457 678 - -
Cmo14g00961 724 CDD STKc_IRAK 385 655 - -
Cmo14g00961 724 MobiDBLite consensus disorder prediction 336 356 - -
Cmo14g00961 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Cmo14g00961 724 MobiDBLite consensus disorder prediction 665 695 - -
Cmo14g00961 724 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Cmo14g00961 724 PANTHER OS01G0750732 PROTEIN 26 724 - -
Cmo14g00961 724 SUPERFAMILY Protein kinase-like (PK-like) 354 656 IPR011009 -
Cmo14g00961 724 Gene3D Phosphorylase Kinase; domain 1 345 456 - -
Cmo14g00961 724 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 26 724 - -
Cmo14g00961 724 ProSiteProfiles Protein kinase domain profile. 379 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cmo01g00292 Cmo14g00961 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo11g01976 Cmo-Chr11:13587372 Cmo14g00961 Cmo-Chr14:5121609 1.15E-105 dispersed
Cmo14g00961 Cmo-Chr14:5121609 Cmo19g00148 Cmo-Chr19:815151 2.46E-132 dispersed
Cmo01g00292 Cmo-Chr1:1389479 Cmo14g00961 Cmo-Chr14:5121609 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74839 PF00069 Pkinase 5.50E-44 CL0016 Cmo PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00961 - - cpep:111790593 1365.9