Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00972 ATGGAGGAGACTTTTGTTCCTCTTCGTGGAATCAAGAATGATCTCAAAGGGAGGTTAGTGTGCTACAAACAAGACTGGACCAGTGGGTTGAGAGCTGGGTATAGGATTTTGGCTCCCACTACTTACATATTCTTTGCCTCTGCAATTCCTGTCATTTCATTTGGTGAACAGTTGGAGAGAAGTACTGATGGGGTACTCACTGCTGTTCAAACCTTAGCCTCCACAGCTCTTTGTGGTATCATTCACTCCATTGTTGGAGGTCAACCTTTGCTCATCTTAGGAGTGGCAGAGCCTACTGTTATTATGTATACCTTCATGTTTAATTTTGCGAAGGAACGACCCGAGTTGGGTCGGAATCTGTTTCTAGCATGGAGTGGATGGGTGTGTGTTTGGACTGCAGCCTTGCTGTTCTTAATGGCTATATTAGGAGCTTGTTCCATCATTAATCGGTTCACACGTCTCGCCGGTGAATTGTTCGGTATGCTTATAGCAATGCTTTTCATGCAGCAAGCAGTGAAAGGACTCGTGGATGAGTTTCGCATCCCGGAACGGGAAAATGCAACGTTGATCGAGTTTATACCTTCTTGGAGGTTTGCCAATGGGATGTTTGCTTTGGTATTGTCATTTGGCCTTCTACTCACTTCGTTAAGGAGTCGAAAGGCACGGTCATGGCGATATGGATCAGGTTGGCTCAGAAGCTTGATAGCAGACTATGGAGTGCCGCTCATGGTTCTTGTTTGGACAGGTATTTCCTATATACCCTCAAAAAGTGTCCCACAAGGAATCCCGAGGCGACTCTTTAGCCCGAATCCGTGGTCTCACGGTGCGTACGAAAATTGGACTGTTATTAAGGATATGCTTGACGTTCCTGTTAGTTATATCTGTGGAGCTTTCATCCCGGCTACGATGATCGCGGTGCTTTACTATTTCGATCATAGTGTTGCATCTCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGGAAACCATCTTCTTACCATTATGATTTACTTCTATTGGGATTCTTGACCTTAATATGTGGTCTTCTAGGAATCCCTCCATCCAATGGTGTCATCCCACAATCTCCGATGCATACGAAGAGCCTGGCTACTCTCAAACACCAGTTGTTGCGGAATAAACTCGTAGAAACGGCGCAGAGTAGTATGAGAAAGAATGCGAGCTTGGGTCAGTTGTATAGAAATATGCAAGAAGCATATCAACAAATGCAGACCCCTTTGATCTACCAACAGCCTGCGGTTCGTGGACTGAATGAGCTAAAGGAGACAACCATTCAAGCAGCTTCTAGTATGGGCAGTTTCGACGCTCCGGTTGATGAGACAATATTCGATATCGAAAAGGAAATCGACGATCTATTGCCTGTTGAGGTGAAAGAACAGCGTGTCAGTAACTTGCTTCAAGCTGCAATGGTGGGAGGATGCGTTGCAGCCATGCCGATCCTTAAAAAGATCCCGACATCGGTTCTATGGGGTTACTTCGCCTTTATGGCGATCGAAAGCTTGCCTGGTAATCAGTTTTGGGAAAGAATCTTGTTGCTCTTCACTGCACCTAGCAGAAGATACAAAGTTCTTGAGGATTACCACGCGACGTTCGTCGAGACCGTGCCGTTCAAGGCCATTGCTCTTTTTACCATTTTTCAAACAGTATATTTGTTCATATGTTTTGGACTAACATGGGTTCCAATTGCTGGGGTGATGTTTCCTCTAATGATTATGCTCCTTGTCCCTGTAAGACAATACCTTCTTCCCAAGTTTTTCAAAGGTGCACATCTCCAAGATCTCGATGCAGCCGAATTCGAAGAAGCGCCAGCTTTACCGTTTAATCTTGCAACGGAAGCCGAGCTCGGTGCAGGAGCATCGTTCGGTGGGGACAGAGAGATTTTAGACGAGGTTATCACTCGAAGCCGTGGTGAATTTAGGCATATTAGCAGTCCTAAAATCACAAGCTCCACGGCAACGCCAATGTGTGACCGAAAAAGTATCGATAGCCCTCGTCGCTCTTTCAGCCCTCGGGTGAGCGAGCTAAGAGGAGAGCAGAGTCCTCGAGCCAGTGGACGAGGAACACCGGGTCAGAGAAGTGCAGAAGCTAAGCCATCCAGTTTGGGAAAGAGCCCTCTTAAGAACACAGCATCAAAGTAG 2154 46.15 MEETFVPLRGIKNDLKGRLVCYKQDWTSGLRAGYRILAPTTYIFFASAIPVISFGEQLERSTDGVLTAVQTLASTALCGIIHSIVGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNLFLAWSGWVCVWTAALLFLMAILGACSIINRFTRLAGELFGMLIAMLFMQQAVKGLVDEFRIPERENATLIEFIPSWRFANGMFALVLSFGLLLTSLRSRKARSWRYGSGWLRSLIADYGVPLMVLVWTGISYIPSKSVPQGIPRRLFSPNPWSHGAYENWTVIKDMLDVPVSYICGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLICGLLGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVETAQSSMRKNASLGQLYRNMQEAYQQMQTPLIYQQPAVRGLNELKETTIQAASSMGSFDAPVDETIFDIEKEIDDLLPVEVKEQRVSNLLQAAMVGGCVAAMPILKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKAIALFTIFQTVYLFICFGLTWVPIAGVMFPLMIMLLVPVRQYLLPKFFKGAHLQDLDAAEFEEAPALPFNLATEAELGAGASFGGDREILDEVITRSRGEFRHISSPKITSSTATPMCDRKSIDSPRRSFSPRVSELRGEQSPRASGRGTPGQRSAEAKPSSLGKSPLKNTASK 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5192107 5195739 - CmoCh14G009720.1 Cmo14g00972 396238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00972 717 MobiDBLite consensus disorder prediction 648 662 - -
Cmo14g00972 717 MobiDBLite consensus disorder prediction 698 717 - -
Cmo14g00972 717 PANTHER ANION EXCHANGE PROTEIN 1 699 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cmo14g00972 717 Gene3D Helical hairpin bin 18 60 - -
Cmo14g00972 717 Pfam HCO3- transporter family 8 180 IPR011531 GO:0006820|GO:0016021
Cmo14g00972 717 Pfam HCO3- transporter family 460 550 IPR011531 GO:0006820|GO:0016021
Cmo14g00972 717 Pfam HCO3- transporter family 202 373 IPR011531 GO:0006820|GO:0016021
Cmo14g00972 717 PANTHER BORON TRANSPORTER 2-RELATED 1 699 - -
Cmo14g00972 717 MobiDBLite consensus disorder prediction 648 717 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo01g00278 Cmo14g00972 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00972 Cmo-Chr14:5192107 Cmo14g01361 Cmo-Chr14:11281181 0 dispersed
Cmo13g00915 Cmo-Chr13:8095554 Cmo14g00972 Cmo-Chr14:5192107 0 transposed
Cmo01g00278 Cmo-Chr1:1310631 Cmo14g00972 Cmo-Chr14:5192107 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00972 K24194 - csv:101205388 1342.02