Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g00978 ATGGCAACCATGGCTCTTTCATCTACATTCACCGGAAAGGCTATTCCTTTGAACGCACCAACTGAGATCTCATCCTCGGTTCGCAGCAACAGTAGAGTCTCAATGAGGAGATCTGGAAAGCCAGCAGCTTCCTCTGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACCTTGGACCACTGTCTGGTGAGCCACCATCTTACCTCAAAGGAGAGTTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGATCCCGAGACCTTTGCCAAGAACCGAGAGCTGGAAGTGATTCACAGCAGATGGGCCATGCTTGGAGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCACGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAGTTACCGATCCCATCTACCCCGGCGGTAGCTTTGATCCCCTCGGGCTGGCTGACGATCCCGAGGCGTTTGCAGAGCTTAAGGTTAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTCGGATATTTTGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCAGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTCGTCCCTGGGAAGTGA 798 50.25 MATMALSSTFTGKAIPLNAPTEISSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGPLSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 265
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
14 5235919 5236716 - CmoCh14G009780.1 Cmo14g00978 396244
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g00978 265 MobiDBLite consensus disorder prediction 26 41 - -
Cmo14g00978 265 Pfam Chlorophyll A-B binding protein 65 231 IPR022796 -
Cmo14g00978 265 MobiDBLite consensus disorder prediction 26 47 - -
Cmo14g00978 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Cmo14g00978 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 2 265 IPR001344 GO:0009765|GO:0016020
Cmo14g00978 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 2 265 - -
Cmo14g00978 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g00978 Cmo-Chr14:5235919 Cmo20g00287 Cmo-Chr20:1389168 7.91E-168 dispersed
Cmo01g00276 Cmo-Chr1:1287223 Cmo14g00978 Cmo-Chr14:5235919 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g00978 K08912 - csv:101203342 515.768