Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g00978 | ATGGCAACCATGGCTCTTTCATCTACATTCACCGGAAAGGCTATTCCTTTGAACGCACCAACTGAGATCTCATCCTCGGTTCGCAGCAACAGTAGAGTCTCAATGAGGAGATCTGGAAAGCCAGCAGCTTCCTCTGGCAGCCCATGGTACGGTCCCGACCGTGTCAAGTACCTTGGACCACTGTCTGGTGAGCCACCATCTTACCTCAAAGGAGAGTTCCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGATCCCGAGACCTTTGCCAAGAACCGAGAGCTGGAAGTGATTCACAGCAGATGGGCCATGCTTGGAGCTCTAGGATGTGTATTCCCAGAGCTTCTTTCCAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCACGCACAGAGCATTTTGGCCATTTGGGCATCTCAAGTAGTGCTAATGGGTGCAGTTGAAGGTTACCGTATTGCTGGAGGACCACTTGGAGAAGTTACCGATCCCATCTACCCCGGCGGTAGCTTTGATCCCCTCGGGCTGGCTGACGATCCCGAGGCGTTTGCAGAGCTTAAGGTTAAAGAACTCAAGAACGGCCGTCTTGCAATGTTTTCCATGTTCGGATATTTTGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTCGCAGATCATCTTGCAGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTCGTCCCTGGGAAGTGA | 798 | 50.25 | MATMALSSTFTGKAIPLNAPTEISSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGPLSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK | 265 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5235919 | 5236716 | - | CmoCh14G009780.1 | Cmo14g00978 | 396244 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g00978 | 265 | MobiDBLite | consensus disorder prediction | 26 | 41 | - | - | |
Cmo14g00978 | 265 | Pfam | Chlorophyll A-B binding protein | 65 | 231 | IPR022796 | - | |
Cmo14g00978 | 265 | MobiDBLite | consensus disorder prediction | 26 | 47 | - | - | |
Cmo14g00978 | 265 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 258 | - | - | |
Cmo14g00978 | 265 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 2 | 265 | IPR001344 | GO:0009765|GO:0016020 | |
Cmo14g00978 | 265 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC | 2 | 265 | - | - | |
Cmo14g00978 | 265 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 262 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g00978 | Cmo-Chr14:5235919 | Cmo20g00287 | Cmo-Chr20:1389168 | 7.91E-168 | dispersed | |
Cmo01g00276 | Cmo-Chr1:1287223 | Cmo14g00978 | Cmo-Chr14:5235919 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g00978 | K08912 | - | csv:101203342 | 515.768 |