Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01022 ATGGCGTTGGCTAGTCGCATGAGATCCACCATCCCTGTCCTCAGCAAGTTTTTGAGGTCCGAATCGTCCTGCACTCCGGTACTGCTCTCAAGGACCTATGCCGCTGCATCAGGGAAAAGTGAAGCAAAAGTGAAGGAGCTTCCTATTGCATTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTCTGTATATAGCTGCAGTAAAAGCTAATTCTTTAGACAACGTGGAGTCTGAGCTTGTTAACTTTGTCGAGGCTATTAAGAAAAGCCCAACATTTTCTCAGTTCACAATGGACCTGTCAGTTCCAGCTGAAACTAGAGTTAAGGCTATCACTGAAATTTCTGCGGAAGCTAAATTTTCGGATGTCGTAAAGAACTTTTTAGTTGTGCTGGCTGAGAATGGGAGGCTGAGATATGTAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAGGGGAGAAGTTGAAGCAGTTGTTACTACTGTTATTCCCATTCCACCACAAGAAGAGAAAGAATTGACGGAGACGTTGCAAGATATAATTGGACAGGGCAAGAAGGTTAAGCTCGAGCAGAAGATTGATCCCAGCATACTTGGTGGTCTAGTTGTAGAATTTGGCGAGAAGGTATTGGACATGTCCATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGCGTCAACCTGTAACTTTTGATGGACTCTGA 711 44.44 MALASRMRSTIPVLSKFLRSESSCTPVLLSRTYAAASGKSEAKVKELPIALFGGSGNYASALYIAAVKANSLDNVESELVNFVEAIKKSPTFSQFTMDLSVPAETRVKAITEISAEAKFSDVVKNFLVVLAENGRLRYVDSIAKRFLELTMAHRGEVEAVVTTVIPIPPQEEKELTETLQDIIGQGKKVKLEQKIDPSILGGLVVEFGEKVLDMSIKTRARQMERFLRQPVTFDGL 236
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5566786 5569530 - CmoCh14G010220.1 Cmo14g01022 396288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01022 236 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 189 208 IPR020781 GO:0015986|GO:0016020|GO:0046933
Cmo14g01022 236 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 57 226 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PRINTS ATP synthase delta subunit signature 54 73 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PRINTS ATP synthase delta subunit signature 124 135 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PRINTS ATP synthase delta subunit signature 135 149 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PRINTS ATP synthase delta subunit signature 187 202 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PRINTS ATP synthase delta subunit signature 202 220 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 Hamap ATP synthase subunit delta [atpD]. 50 229 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 Pfam ATP synthase delta (OSCP) subunit 56 225 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 25 229 - -
Cmo14g01022 236 PANTHER ATP SYNTHASE DELTA CHAIN 25 229 IPR000711 GO:0015986|GO:0046933
Cmo14g01022 236 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 55 156 IPR026015 -
Cmo14g01022 236 Gene3D - 55 147 IPR026015 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo14g01022 Cmo17g00927 CCT
Cmo01g00234 Cmo14g01022 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g00954 Cmo-Chr1:5912764 Cmo14g01022 Cmo-Chr14:5566786 2.73E-13 transposed
Cmo09g01238 Cmo-Chr9:10615482 Cmo14g01022 Cmo-Chr14:5566786 2.86E-14 transposed
Cmo01g00234 Cmo-Chr1:1052110 Cmo14g01022 Cmo-Chr14:5566786 1.53E-154 wgd
Cmo14g01022 Cmo-Chr14:5566786 Cmo17g00927 Cmo-Chr17:8264452 1.17E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01022 K02137 - tcc:18614630 329.331