Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01057 ATGGCTGTTGAAGCTCTTCAGAATGACTTCATTTTCCGCTCCAAACTGCCCGATATTTACATTCCTAACCACCTTCCTCTGCACTCCTATTGCCTACACGAAAACCTCGCCAAAATCGGCCACCGGACTTGTCTAATCAACTCCGTCACCGGCGAATCCTTTACCTACCACGACGTCGACCTCGCCGCACGCAAGGTCGCCTCGGGATTGAACAAACTCGGCATTGCTCAAGGCGATGTGATTATGCTCATCCTCCAGAATTCGCCGGAATTCGTCTTCGCTTTCCTTGGTGCGTCGTATCGCGGCGCGATTATGACGGCGGCGAATCCTTTCTTCACGGCGGCGGAGATCGCAAAGCAAGCAAAAGGATCGAATGCGAAATTAATCGTGACGCAATCGTCGTATTATGAAAAAGTGAAGGAAATAACAGAGGAATTACCTGATGTTAAAATCATGACCGTCGATTCTCCGCCGGATGGTTGTTTATCGTTCGCCGATCTAATTCAGGCCGACGAACGAGAGATGCCGACTGTTGAAATCAATCCGGACGATGTGGTTGCGCTGCCGTATTCCTCTGGAACCACCGGATTGCCGAAAGGAGTGATGCTTACACACAGAGGATTAGTGACGAGTGTGGCTCAGCAAGTGGACGGCGAAAATCCGAATCTGTACTATCGAAATGAGGACGTGATTCTGTGCGTTTTGCCGCTCTTCCATATCTATTCGCTTAATTCCGTCCTCCTCTGCGGATTACGGGCGGGGACCACCATTTTGATCATGCCTAAATTCGAGATCGGTTCGCTTTTGCAATTGGTGCAGAAATTCAAAGTGTCGATTGCGCCGATTGTGCCGCCGATTGTTTTGGCCATCGCGAAGTCGCCGGACCTCGATAAGTACGATCTTTCGTCTATCAGAGTTATCAAATGCGGCGGCGCTCCGCTTGGGAAGGAGCTTGAAGATACCGTGAGAGCCAAGTTTCCCAAGGCTGTGCTCGGCCAGGGATACGGAATGACGGAGGCCGGCCCAGTGCTAACGATGGGTTTAGCATTTGCAAAGGAGCCATTTCCGATGAAACCCGGCGCCTGCGGCACCGTCGTGAGAAACGCCGAGATGAAGATCGTCGACACCGAAAACGGCGGTTCGTTGCCTCGAAACACGCCGGGAGAGATCTGCATCAGAGGCGATCAAATCATGAAAGGGTATCTGAACAATCCGGAGGCGACAGCCGCCACAATCGACAAGGATGGGTGGTTGCACACCGGCGACATCGGATTCATCGACGACGACGACGAGCTGTTCATCGTCGATCGATTGAAGGAACTTATAAAGTATAAGGGATTTCAAGTGGCTCCGGCGGAAGTGGAAGCTCTGTTGCTCACTCATCCGGCAATCTCTGATGCCGCCGTCGTTCCAATGAAAGATGAAGAAGCCGGAGAGGTTCCCGTTGCGTTCGTGGTGAGATTGAAGAACTCTGAAGTAACTGAGGATGAAATTAAACAATTCATATCAAAGCAGGTGGTATTCTACAAGAGAATCAAGAGGGCGTTTATGATAGACGCAATTCCGAAATCGCCGTCGGGAAAGATCTTGAGGAAGGAGTTGAGGGCAAAGTTGGCAGCTGGTTTTCCAAATTCTAATTAA 1641 50.7 MAVEALQNDFIFRSKLPDIYIPNHLPLHSYCLHENLAKIGHRTCLINSVTGESFTYHDVDLAARKVASGLNKLGIAQGDVIMLILQNSPEFVFAFLGASYRGAIMTAANPFFTAAEIAKQAKGSNAKLIVTQSSYYEKVKEITEELPDVKIMTVDSPPDGCLSFADLIQADEREMPTVEINPDDVVALPYSSGTTGLPKGVMLTHRGLVTSVAQQVDGENPNLYYRNEDVILCVLPLFHIYSLNSVLLCGLRAGTTILIMPKFEIGSLLQLVQKFKVSIAPIVPPIVLAIAKSPDLDKYDLSSIRVIKCGGAPLGKELEDTVRAKFPKAVLGQGYGMTEAGPVLTMGLAFAKEPFPMKPGACGTVVRNAEMKIVDTENGGSLPRNTPGEICIRGDQIMKGYLNNPEATAATIDKDGWLHTGDIGFIDDDDELFIVDRLKELIKYKGFQVAPAEVEALLLTHPAISDAAVVPMKDEEAGEVPVAFVVRLKNSEVTEDEIKQFISKQVVFYKRIKRAFMIDAIPKSPSGKILRKELRAKLAAGFPNSN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5785268 5787829 - CmoCh14G010570.1 Cmo14g01057 396323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01057 546 CDD 4CL 21 534 - -
Cmo14g01057 546 ProSitePatterns Putative AMP-binding domain signature. 188 199 IPR020845 -
Cmo14g01057 546 PANTHER 4-COUMARATE--COA LIGASE 2-LIKE 6 540 - -
Cmo14g01057 546 SUPERFAMILY Acetyl-CoA synthetase-like 17 540 - -
Cmo14g01057 546 Gene3D - 439 540 IPR045851 -
Cmo14g01057 546 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 540 - -
Cmo14g01057 546 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Cmo14g01057 546 Pfam AMP-binding enzyme 35 444 IPR000873 -
Cmo14g01057 546 Gene3D - 5 438 IPR042099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00699 Cmo-Chr5:3587233 Cmo14g01057 Cmo-Chr14:5785268 0 dispersed
Cmo10g00432 Cmo-Chr10:1969688 Cmo14g01057 Cmo-Chr14:5785268 0 dispersed
Cmo11g00395 Cmo-Chr11:1967164 Cmo14g01057 Cmo-Chr14:5785268 0 dispersed
Cmo14g01057 Cmo-Chr14:5785268 Cmo01g00547 Cmo-Chr1:2706399 1.24E-140 dispersed
Cmo01g00207 Cmo-Chr1:931413 Cmo14g01057 Cmo-Chr14:5785268 0 wgd
Cmo14g01057 Cmo-Chr14:5785268 Cmo17g00887 Cmo-Chr17:8062887 0 wgd
Cmo14g01057 Cmo-Chr14:5785268 Cmo08g00564 Cmo-Chr8:3456378 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01057 K01904 - csv:101215427 962.214