Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01066 | ATGGCGGATCTCAAAGAGCGGTTGCTTCCACCGAAACCTTCATCTGCTATTAATCTTAGGGAGACAATTAATAATCGACCATCAGCCTCTGGGAGGGTGCCTTTTCAAGGTGTGGATGTTCTAGGGCTGAAGAAGCGAGGGCAGGGACTTAGATCTTGGATCCGAGTAGATTCCTCTGGGAACTCCCAGATTATTGAGGTTGATAAGTTCACCATGATGCGTCGTTGTGATCTACCTGCGCGTGATTTACGTTTGCTTGATCCTTTGTTTGTTTACCCTTCAACAATTCTTGGTAGAGAGAAGGCTATTGTGGTCAATCTAGAGCAGATTCGATGCATTATAACAGCTGAAGAAGTTTTGCTATTAAATTCCCTTGATAGTTATGTACTGCAGTATGTGGTAGAGCTACAGAGGCGATTGAAAACCACCGGGGTTGATGAGGTTTGGCAGAATGACGCAAATCATGGAGCTGACTTAAATCGAAGAAGAGGAAGCAGGACTTTCGATAATGTATTTGGAAACACCTCTCCTGATTATTTGCCCTTTGAATTCAGAGCTTTAGAAGTTGCTTTGGAAGCAGCTTGTACATTTCTTGATTCCCAGGCTGCAGAGTTAGAAATCGAGGCATACCCGTTGCTAGATGAACTTACATCCAAAATCAGTACATTAAATTTGGAGCGGGTCCGCCGCTTGAAAAGTAGACTTGTTGCCCTGACTCGTAGGGTTCAGAAGGTTAGGGATGAAATAGAGCAGCTCATGGATGACGATGGAGATATGGCAGAAATGTATCTGACTGAGAAGAAAATGAGAATGGAATCCTTTGTTTATGGCGATCAGTCTGTTACTGGATACAGATCAATTGATGGAGCATCTTTTTCTGCTCCTGTTTCTCCTGTATCTTCACCACCCGAATCTCGCAAGCTCGAGAAGAGCCTGAGCATTGCCAGGAGCCGGCATGAGAGTACGAAAAGTTCAGAAAGTTCAACTGAAAATATAGAGGAGCTTGAGATGCTTCTTGAAGCATATTTTGTTGTCATTGATAGCACCCTGAATAAGTTGACATCGTTGAAGGAATACATCGATGACACAGAAGATTTCATCAACATCCAGCTGGATAATGTACGTAATCAGTTGATCCAGTTTGAGCTGCTACTCACTACTGCAACATTTGTCGTTGCCATTTTTGGGGTGGTAGCTGGAATTTTTGGCATGAATTTTGAAATACCAATGTTTGGGAATCCTGATGCATTCAAATGGGTTCTTCTAATAACAGGAGTAAGTGGAATCATCATATTTTCTGCATTTGTTTGGTTTTTCAGATACAAAAGACTGATGCCACTCTAA | 1344 | 42.41 | MADLKERLLPPKPSSAINLRETINNRPSASGRVPFQGVDVLGLKKRGQGLRSWIRVDSSGNSQIIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITAEEVLLLNSLDSYVLQYVVELQRRLKTTGVDEVWQNDANHGADLNRRRGSRTFDNVFGNTSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKMRMESFVYGDQSVTGYRSIDGASFSAPVSPVSSPPESRKLEKSLSIARSRHESTKSSESSTENIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIPMFGNPDAFKWVLLITGVSGIIIFSAFVWFFRYKRLMPL | 447 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5873476 | 5876776 | + | CmoCh14G010660.1 | Cmo14g01066 | 396332 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01066 | 447 | Gene3D | Magnesium transport protein CorA, transmembrane region | 125 | 378 | - | - | |
Cmo14g01066 | 447 | Gene3D | Magnesium transport protein CorA, transmembrane region | 385 | 445 | - | - | |
Cmo14g01066 | 447 | Pfam | CorA-like Mg2+ transporter protein | 327 | 435 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
Cmo14g01066 | 447 | CDD | Mrs2_Mfm1p-like | 53 | 444 | IPR039204 | - | |
Cmo14g01066 | 447 | MobiDBLite | consensus disorder prediction | 293 | 307 | - | - | |
Cmo14g01066 | 447 | Gene3D | - | 41 | 124 | - | - | |
Cmo14g01066 | 447 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 3 | 447 | IPR039204 | - | |
Cmo14g01066 | 447 | MobiDBLite | consensus disorder prediction | 309 | 329 | - | - | |
Cmo14g01066 | 447 | MobiDBLite | consensus disorder prediction | 293 | 329 | - | - | |
Cmo14g01066 | 447 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 384 | 437 | IPR045863 | - | |
Cmo14g01066 | 447 | Coils | Coil | 228 | 255 | - | - | |
Cmo14g01066 | 447 | PANTHER | MAGNESIUM TRANSPORTER MRS2-10 | 3 | 447 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cmo01g00196 | Cmo14g01066 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo11g01427 | Cmo-Chr11:10049721 | Cmo14g01066 | Cmo-Chr14:5873476 | 2.58E-115 | dispersed | |
Cmo12g00082 | Cmo-Chr12:443820 | Cmo14g01066 | Cmo-Chr14:5873476 | 1.49E-145 | dispersed | |
Cmo14g01066 | Cmo-Chr14:5873476 | Cmo17g00183 | Cmo-Chr17:1083418 | 2.53E-118 | dispersed | |
Cmo01g00196 | Cmo-Chr1:883750 | Cmo14g01066 | Cmo-Chr14:5873476 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01066 | K16075 | - | csv:101217419 | 798.505 |