Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01072 | ATGGCGGGTAAGGCGGCGCCGGCGAGGAATGTTCTGTTTGGAAAATACGAAATGGGTCGGCTATTGGGGAAAGGAACCTTTGCGAAGGTCTATCATGGAACAAACTTGATGACCCACGACAGTGTCGCCATTAAAGTGATCCTCAAGGACAGGGTAAAGAAAGAGGGACTTCTTGAGCAAGTCCGGCGAGAAATTTCTGTCATGGGGTTGGTTCGTCATCCCCATATAGTGGAATTGAAAGAAGTAATGGCCACGAAATCCAAGGTGTATTTTGTGATGGAATACGTTAATGGAGGCGAACTGTTTGTTAAATTGTCTCAACAAGGAAAATTGACAGAAGATGGAGGAAGAAAGTACTTTCAACAGCTTCTCTCCGCCGTGGACTTTTGCCACAGCCGTGGTGTCTCTCACCGTGATTTGAAGCCTGAAAATCTCCTTCTCGACGTGAATGGGAATTTGAAGGTATCTGATTTTGGCCTCTCCGCCCTGCCGGAGCAGCTCCGGATCGACGGATTGCTTCACACACGGTGTGGAACACCGGCGTATGTAGCGCCTGAGGTGCTCAGAAAGAGGGGATACGAGGGCGCTAAGTCGGATCTTTGGTCTTGTGGAGTGATTTTGTTTGTGTTGCTTGCTGGGTCTCTGCCATTTAAAGCTGATAATGTGATGAAGTTGTATAGGAAGATTTTCAAGGCGGAGTTTGAGTTTCCTCCTTGGTTTTCTTCAGAAGCTAAGGAAATGGTGTCAAAGCTTCTGGTTGTTGATCCTGAGAAGAGAGCTTCAATGGATGAGATAATGCAGAGTTGTTGGTTTCAAAAGGGCTTCACAAAGCCACTTTCATTCAATGACAAAGACGAACTCAACAGTGAAATCTCTGACTTGACAAATCCCAAGTTGTTGTCATCTTCTCCTCCTTTCTACAACGCCTTCGAGTTCATTTCCTCAATGTCCTCTGGTTTTGACTTGACTAGTTTGTTTGAAAGCAAGAAGAAACAAGCCTCAATTTTCACTTCAAAATGCTCTGCTTCAGCCATTATAGCCAAGCTTCAGTCTCTAGCGCAGAAGCTGAACTTCAAGGCTACTAATCAGAGGGAGTTCAAGGTGAGACTGCAGGCCAAGGAGGAGGGGAGGAAAGGGAAGCTGGCGGTGACGGTGGAGGTTTACGAGGTAGCGCCGGAGCTGGCGGTGGTCGAGTTCTCGAAGTCGGCAGGGGACACATTGGAGTACAATAAGTTTTGTGAGAAGGATGTGAGGCCTGCATTGAAGGACATCGTTTGGAGCTGGCAAGGAGAGAATGAGTGCCTATAA | 1308 | 47.17 | MAGKAAPARNVLFGKYEMGRLLGKGTFAKVYHGTNLMTHDSVAIKVILKDRVKKEGLLEQVRREISVMGLVRHPHIVELKEVMATKSKVYFVMEYVNGGELFVKLSQQGKLTEDGGRKYFQQLLSAVDFCHSRGVSHRDLKPENLLLDVNGNLKVSDFGLSALPEQLRIDGLLHTRCGTPAYVAPEVLRKRGYEGAKSDLWSCGVILFVLLAGSLPFKADNVMKLYRKIFKAEFEFPPWFSSEAKEMVSKLLVVDPEKRASMDEIMQSCWFQKGFTKPLSFNDKDELNSEISDLTNPKLLSSSPPFYNAFEFISSMSSGFDLTSLFESKKKQASIFTSKCSASAIIAKLQSLAQKLNFKATNQREFKVRLQAKEEGRKGKLAVTVEVYEVAPELAVVEFSKSAGDTLEYNKFCEKDVRPALKDIVWSWQGENECL | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5903459 | 5904766 | + | CmoCh14G010720.1 | Cmo14g01072 | 396338 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01072 | 435 | ProSiteProfiles | NAF domain profile. | 302 | 327 | IPR018451 | GO:0007165 | |
Cmo14g01072 | 435 | Gene3D | Transferase(Phosphotransferase) domain 1 | 8 | 310 | - | - | |
Cmo14g01072 | 435 | SUPERFAMILY | Protein kinase-like (PK-like) | 12 | 272 | IPR011009 | - | |
Cmo14g01072 | 435 | PANTHER | - | 9 | 434 | - | - | |
Cmo14g01072 | 435 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g01072 | 435 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED | 9 | 434 | - | - | |
Cmo14g01072 | 435 | Pfam | NAF domain | 304 | 360 | IPR004041 | GO:0007165 | |
Cmo14g01072 | 435 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g01072 | 435 | CDD | CIPK_C | 308 | 422 | - | - | |
Cmo14g01072 | 435 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo14g01072 | 435 | Gene3D | Kinase associated domain 1, KA1 | 311 | 427 | - | - | |
Cmo14g01072 | 435 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 54 | IPR017441 | GO:0005524 | |
Cmo14g01072 | 435 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo14g01072 | Cmo-Chr14:5903459 | Cmo10g00509 | Cmo-Chr10:2286667 | 9.13E-170 | dispersed | |
Cmo14g01072 | Cmo-Chr14:5903459 | Cmo09g00419 | Cmo-Chr9:1843227 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74846 | PF00069 | Pkinase | 8.80E-75 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01072 | - | - | csv:101218600 | 778.859 |