Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01073 ATGGCGGCTGGAGGGTCTAGTTCTGGGCAGCCACAATTCATTGCGAGGGCTGGAAATGAGAGTTTTTCACACGCACCATTGATCGAGAATCCGGAAACTGATCAGATTGTTGTTCCTGATAAGAAAAGCTGGAAGAACCTTTTTGCATATATGGGCCCGGGATTTCTTGTATCCATTGCATATATTGATCCTGGGAATTTTGAAACTGACCTTCAATCTGGAGCTCAGTACAAGTATGAGTTGCTTTGGATCATATTAGTGGCTTCCTGTGCTGCCCTCATTATTCAATCCTTAGCAGCAAATCTAGGGGTTGTCACAGGGAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGTGCAAAATTTCATCCTATGGGTTCTTGCTGAGATTGCAATTGTTGCATGTGACATTCCTGAAGTTATAGGAACCGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTATGGTGTGGTGTTCTTCTAACAGGGCTTAGCACACTATTCCTTCTTGCACTGCAGCAATATGGGATTAGAAAGCTTGAATTCTTGATTGCCTTTCTTGTATTGACCATTGCGGTTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCTGATGTTGGAGAAGTTTTTTATGGATTATTTGTCCCTCAATTAAAAGGGAGTGGTGCTACTGGTCTTGCCATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCATTCGGCACTCGTGCTCTCTAGGAAAATACCCCGATCCGTTTCTGGCATCAAGGAAGCTTGCCGATTTTATATGATCGAGAGTGGATTTGCTCTCATGGTGGCTTTCCTGATTAATGTATCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATTCACCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGATTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTATTGGCATCTGGACAGAGTTCTACCATAACAGGAACATATGCAGGACAGTATGTTATGCAGGGGTTTCTCGATTTGAAACTGACGCCATGGGTCCGAAACTTTTTAACCCGATGCTTAGCAATTGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGCTCATCATTATTGCGTCGATGATTTTGTCATTTGAACTTCCTTTTGCTCTCGTTCCTCTTCTGAAGTTCACAAGCAGCAGGACCAAGATGGGAACACATGTCAACTCCACTGCGATTACGGTATTGACATGGATTATTGGGTGCCTGATCATGGCTATAAACATATACTACCTCATGACCCGCTTCATCCACGTTCTCCTTCACAACGACCTCCAACTCGTAGCAGTCGTCTTCATAGGGATACTTGGATTTTCAGGGATGGCAATATATTTAGCAGGAATAGCTTATCTGGTTTTCAGAAAGACCAAGGAGAGCACTCATCTGTTGGCACTAACAACAGAAGAAAGCCAACAACTGAGCAACACACCGAGTAAGAGGTCAGGATATGGTCTCCCAAATGAAGATTTAACAAGCATGCAGTTGCCTCAAAGAGTTAGAACTACAAGTGATGATGTAAACTGA 1641 42.78 MAAGGSSSGQPQFIARAGNESFSHAPLIENPETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCKAEYPKVQNFILWVLAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLFLLALQQYGIRKLEFLIAFLVLTIAVCFFLELGYAKPDVGEVFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVSGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAITVLTWIIGCLIMAINIYYLMTRFIHVLLHNDLQLVAVVFIGILGFSGMAIYLAGIAYLVFRKTKESTHLLALTTEESQQLSNTPSKRSGYGLPNEDLTSMQLPQRVRTTSDDVN 546
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 5910482 5915600 + CmoCh14G010730.1 Cmo14g01073 396339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01073 546 PANTHER METAL TRANSPORTER NRAMP1 8 540 - -
Cmo14g01073 546 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 423 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 126 152 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 154 173 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 179 200 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 339 358 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 367 384 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PRINTS Natural resistance-associated macrophage protein signature 399 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 Pfam Natural resistance-associated macrophage protein 67 429 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 Hamap Divalent metal cation transporter MntH [mntH]. 32 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 8 540 IPR001046 GO:0016020|GO:0030001|GO:0046873
Cmo14g01073 546 MobiDBLite consensus disorder prediction 512 546 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo02g00515 Cmo-Chr2:2860696 Cmo14g01073 Cmo-Chr14:5910482 1.16E-111 dispersed
Cmo03g01231 Cmo-Chr3:9500320 Cmo14g01073 Cmo-Chr14:5910482 1.09E-29 dispersed
Cmo07g00957 Cmo-Chr7:4654480 Cmo14g01073 Cmo-Chr14:5910482 1.23E-38 dispersed
Cmo14g01073 Cmo-Chr14:5910482 Cmo20g00989 Cmo-Chr20:5643440 3.94E-106 dispersed
Cmo04g02499 Cmo-Chr4:18379971 Cmo14g01073 Cmo-Chr14:5910482 6.03E-175 transposed
Cmo01g00191 Cmo-Chr1:827593 Cmo14g01073 Cmo-Chr14:5910482 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01073 K21398 - csv:101209649 962.985