Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01073 | ATGGCGGCTGGAGGGTCTAGTTCTGGGCAGCCACAATTCATTGCGAGGGCTGGAAATGAGAGTTTTTCACACGCACCATTGATCGAGAATCCGGAAACTGATCAGATTGTTGTTCCTGATAAGAAAAGCTGGAAGAACCTTTTTGCATATATGGGCCCGGGATTTCTTGTATCCATTGCATATATTGATCCTGGGAATTTTGAAACTGACCTTCAATCTGGAGCTCAGTACAAGTATGAGTTGCTTTGGATCATATTAGTGGCTTCCTGTGCTGCCCTCATTATTCAATCCTTAGCAGCAAATCTAGGGGTTGTCACAGGGAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGTGCAAAATTTCATCCTATGGGTTCTTGCTGAGATTGCAATTGTTGCATGTGACATTCCTGAAGTTATAGGAACCGCTTTTGCATTGAATATGCTCTTCAGCATTCCTGTATGGTGTGGTGTTCTTCTAACAGGGCTTAGCACACTATTCCTTCTTGCACTGCAGCAATATGGGATTAGAAAGCTTGAATTCTTGATTGCCTTTCTTGTATTGACCATTGCGGTTTGCTTCTTCCTGGAGCTGGGCTATGCAAAGCCTGATGTTGGAGAAGTTTTTTATGGATTATTTGTCCCTCAATTAAAAGGGAGTGGTGCTACTGGTCTTGCCATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCATTCGGCACTCGTGCTCTCTAGGAAAATACCCCGATCCGTTTCTGGCATCAAGGAAGCTTGCCGATTTTATATGATCGAGAGTGGATTTGCTCTCATGGTGGCTTTCCTGATTAATGTATCAGTCATTTCAGTTAGTGGTGCAGTTTGCAATTCACCAGATCTAAATAAGGAGGACCAAATGAGCTGCAATGATTTGGACTTGAATAAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCAAAACTTTTTGCCATTGCTTTATTGGCATCTGGACAGAGTTCTACCATAACAGGAACATATGCAGGACAGTATGTTATGCAGGGGTTTCTCGATTTGAAACTGACGCCATGGGTCCGAAACTTTTTAACCCGATGCTTAGCAATTGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGTCTTCTGGGGCTGGGAAGCTCATCATTATTGCGTCGATGATTTTGTCATTTGAACTTCCTTTTGCTCTCGTTCCTCTTCTGAAGTTCACAAGCAGCAGGACCAAGATGGGAACACATGTCAACTCCACTGCGATTACGGTATTGACATGGATTATTGGGTGCCTGATCATGGCTATAAACATATACTACCTCATGACCCGCTTCATCCACGTTCTCCTTCACAACGACCTCCAACTCGTAGCAGTCGTCTTCATAGGGATACTTGGATTTTCAGGGATGGCAATATATTTAGCAGGAATAGCTTATCTGGTTTTCAGAAAGACCAAGGAGAGCACTCATCTGTTGGCACTAACAACAGAAGAAAGCCAACAACTGAGCAACACACCGAGTAAGAGGTCAGGATATGGTCTCCCAAATGAAGATTTAACAAGCATGCAGTTGCCTCAAAGAGTTAGAACTACAAGTGATGATGTAAACTGA | 1641 | 42.78 | MAAGGSSSGQPQFIARAGNESFSHAPLIENPETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALIIQSLAANLGVVTGKHLAEHCKAEYPKVQNFILWVLAEIAIVACDIPEVIGTAFALNMLFSIPVWCGVLLTGLSTLFLLALQQYGIRKLEFLIAFLVLTIAVCFFLELGYAKPDVGEVFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVSGIKEACRFYMIESGFALMVAFLINVSVISVSGAVCNSPDLNKEDQMSCNDLDLNKASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLTPWVRNFLTRCLAIVPSLIVAIIGGSSGAGKLIIIASMILSFELPFALVPLLKFTSSRTKMGTHVNSTAITVLTWIIGCLIMAINIYYLMTRFIHVLLHNDLQLVAVVFIGILGFSGMAIYLAGIAYLVFRKTKESTHLLALTTEESQQLSNTPSKRSGYGLPNEDLTSMQLPQRVRTTSDDVN | 546 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 5910482 | 5915600 | + | CmoCh14G010730.1 | Cmo14g01073 | 396339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01073 | 546 | PANTHER | METAL TRANSPORTER NRAMP1 | 8 | 540 | - | - | |
Cmo14g01073 | 546 | TIGRFAM | nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family | 46 | 423 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 126 | 152 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 154 | 173 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 179 | 200 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 229 | 252 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 339 | 358 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 367 | 384 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PRINTS | Natural resistance-associated macrophage protein signature | 399 | 418 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | Pfam | Natural resistance-associated macrophage protein | 67 | 429 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | Hamap | Divalent metal cation transporter MntH [mntH]. | 32 | 455 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | PANTHER | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER | 8 | 540 | IPR001046 | GO:0016020|GO:0030001|GO:0046873 | |
Cmo14g01073 | 546 | MobiDBLite | consensus disorder prediction | 512 | 546 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo02g00515 | Cmo-Chr2:2860696 | Cmo14g01073 | Cmo-Chr14:5910482 | 1.16E-111 | dispersed | |
Cmo03g01231 | Cmo-Chr3:9500320 | Cmo14g01073 | Cmo-Chr14:5910482 | 1.09E-29 | dispersed | |
Cmo07g00957 | Cmo-Chr7:4654480 | Cmo14g01073 | Cmo-Chr14:5910482 | 1.23E-38 | dispersed | |
Cmo14g01073 | Cmo-Chr14:5910482 | Cmo20g00989 | Cmo-Chr20:5643440 | 3.94E-106 | dispersed | |
Cmo04g02499 | Cmo-Chr4:18379971 | Cmo14g01073 | Cmo-Chr14:5910482 | 6.03E-175 | transposed | |
Cmo01g00191 | Cmo-Chr1:827593 | Cmo14g01073 | Cmo-Chr14:5910482 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01073 | K21398 | - | csv:101209649 | 962.985 |