Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo14g01074 | ATGCCGATCGATACCTCCGCTGCAGTTTCCGGCCAAATTGTGTGCGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTTCGAGGAACTGTTAGAAACCCAGATGATCAAAAGAATGCTCATTTGAAGCAATTGGATGGAGCTAATGAGCGTCTCTCTTTGTATAGCGCTGATCTTCTTGATTTTGAAAGCCTCAAAGCAGCTATTATGGGCTGCGATGGTGTCTTCCACACTGCCTCTCCAGTCACCGATGACCCCGAAAAGGTGGAACAAGCCATAATTGGAACTAAGAATGTCATGACCGCCGCAGCAGAAGCAAAAGTTCGACGAGTAGTGTTCACATCGTCCATCGGCACCGTCTACATGAACCCTAACCGTAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGATCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCGAAGACAATAGCAGAGCAGGCAGCATGGGAAGTTGCAAAAGAAAGAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTACAAGAGGGTGTGAATGCGAGCGTGGTTCATATAATGAAGTACTTGACAGGGTCAGCCAAGACATATGTAAATGCAGTTCAAGGATATGTTGATGTTAAGGATGTGGCCAAAGCCCATGTGTTGGTTTATGAAACTCCGTCAGCCTCAGGCAGATATATATGCGTTGAGAGCATGCTTCATCGTGGAGAATTGGTTGATGTTCTTGCTAAGTTGTTCCCTCAATATCCACTTCCAACCAAGTGTTCTGATGAGGTGAATCCGAGAAAGAAGCCTTATAAATACAGGGTTGAGAAATTGAAGTCATTGGGAATGGAGTTCACACCAATCACACAATGCATATATGAAACAGTGAAGAGCTTACAAGAAAAGGGTCACCTTCCTCTTCCCTCCCAACTTCAGCATTGA | 993 | 45.82 | MPIDTSAAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLKQLDGANERLSLYSADLLDFESLKAAIMGCDGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEAKVRRVVFTSSIGTVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTIAEQAAWEVAKERGVDLVVVNPMLVLGPLLQEGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDVLAKLFPQYPLPTKCSDEVNPRKKPYKYRVEKLKSLGMEFTPITQCIYETVKSLQEKGHLPLPSQLQH | 330 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 5943038 | 5944643 | - | CmoCh14G010740.1 | Cmo14g01074 | 396340 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo14g01074 | 330 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 9 | 325 | - | - | |
| Cmo14g01074 | 330 | PANTHER | CINNAMOYL-COA REDUCTASE | 9 | 325 | - | - | |
| Cmo14g01074 | 330 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 8 | 317 | IPR036291 | - | |
| Cmo14g01074 | 330 | Gene3D | - | 4 | 330 | - | - | |
| Cmo14g01074 | 330 | CDD | FR_SDR_e | 14 | 299 | - | - | |
| Cmo14g01074 | 330 | Pfam | NAD dependent epimerase/dehydratase family | 14 | 244 | IPR001509 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo01g00190 | Cmo-Chr1:825389 | Cmo14g01074 | Cmo-Chr14:5943038 | 0 | dispersed | |
| Cmo14g01074 | Cmo-Chr14:5943038 | Cmo14g01076 | Cmo-Chr14:5989799 | 0 | dispersed | |
| Cmo14g01074 | Cmo-Chr14:5943038 | Cmo14g01075 | Cmo-Chr14:5965793 | 0 | tandem | |
| Cmo02g01297 | Cmo-Chr2:7707174 | Cmo14g01074 | Cmo-Chr14:5943038 | 4.46E-105 | transposed | |
| Cmo04g00936 | Cmo-Chr4:4726613 | Cmo14g01074 | Cmo-Chr14:5943038 | 7.29E-79 | transposed | |
| Cmo09g00017 | Cmo-Chr9:114350 | Cmo14g01074 | Cmo-Chr14:5943038 | 6.82E-96 | transposed | |
| Cmo13g00035 | Cmo-Chr13:227262 | Cmo14g01074 | Cmo-Chr14:5943038 | 2.83E-91 | transposed | |
| Cmo18g01034 | Cmo-Chr18:11105165 | Cmo14g01074 | Cmo-Chr14:5943038 | 5.60E-78 | transposed | |
| Cmo20g00686 | Cmo-Chr20:3384355 | Cmo14g01074 | Cmo-Chr14:5943038 | 1.22E-68 | transposed | |
| Cmo01g00189 | Cmo-Chr1:822203 | Cmo14g01074 | Cmo-Chr14:5943038 | 0 | wgd | |
| Cmo14g01074 | Cmo-Chr14:5943038 | Cmo17g00865 | Cmo-Chr17:7944762 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo14g01074 | K09753 | - | csv:116401652 | 621.313 |