Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmo14g01075 | ATGTCGACTGATACCTCTGCAGTTTCCGGCCAAATTGTGTGTGTCACCGGCGCTGGAGGCTTCATTGCTTCTTGGCTTGTAAAGCTTCTTCTCGAAAAGGGCTACACCGTTCGAGGAACTGTTCGAAACCCAAATGATCAAAAGAATGCTCATTTGAAGCACTTGGATGGAGCTAATGAGCGTCTGTCTCTGTTTCGAGCTGATCTTCTCGATTTTGAAAGCCTCAAAGCAGCTATTATGGGCTGTGATGGTGTTTTCCACACTGCCTCTCCAATGACTGATGATCCCGAAAAGATGGAAGAAGCCATAATTGGGAGTAAGAATGTCATGACCGCCGCCGCAAAAGCAAAAGTTCGACGAGTGGTGTTCACATCATCCATCGGCGCCGTCTACATGAATCCTAACCGAAGCCCCGACACGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGACTTTTGCAAGAACACCAAGAATTGGTATTGCTATGCCAAGACAGTAGCAGAGCAGGCAGCATGGGCAGTGGCAGAAGAAAAAGGAGTGGATTTAGTAGTGGTGAACCCAATGTTGGTATTGGGGCCTCTATTGCAAGAGGCTGTGAATACGAGTGTGGTTCATATAATGAAGTATTTGACAGGGTCAGCCAAGACATATGTAAACGCAGTTCAAGGATATGTTGATGTTAGGGATGTGGCCAAAGCCCATGTCTTGGTTTATGAAGCTCCTTCAGCTTCCGGCAGATATATATGTGTTGAGAGTATGCTTCACCGTGGAGAACTGGTTGATATTCTTGCAGAGTATTTTCCAGAGTATCCCCTCCCAACCAAGTGTTCTGATGAGGTGAATCCCAGAAAGAAGCCTTATAAATACAGTGTTGAGAAGCTGAAGTCATTGGGAGTGGAGTTCATACCAATCAAACAATGCATATATGAAACTGTGAGGAGTTTGCAACAAAAGGGTCATCTTCCACTTCCCTCCAAACTTCAACAATGA | 990 | 45.66 | MSTDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPNDQKNAHLKHLDGANERLSLFRADLLDFESLKAAIMGCDGVFHTASPMTDDPEKMEEAIIGSKNVMTAAAKAKVRRVVFTSSIGAVYMNPNRSPDTVVDESCWSDLDFCKNTKNWYCYAKTVAEQAAWAVAEEKGVDLVVVNPMLVLGPLLQEAVNTSVVHIMKYLTGSAKTYVNAVQGYVDVRDVAKAHVLVYEAPSASGRYICVESMLHRGELVDILAEYFPEYPLPTKCSDEVNPRKKPYKYSVEKLKSLGVEFIPIKQCIYETVRSLQQKGHLPLPSKLQQ | 329 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 14 | 5965793 | 5967050 | + | CmoCh14G010750.1 | Cmo14g01075 | 396341 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmo14g01075 | 329 | PANTHER | CINNAMOYL-COA REDUCTASE | 8 | 324 | - | - | |
| Cmo14g01075 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 315 | IPR036291 | - | |
| Cmo14g01075 | 329 | CDD | FR_SDR_e | 13 | 299 | - | - | |
| Cmo14g01075 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 243 | IPR001509 | - | |
| Cmo14g01075 | 329 | Gene3D | - | 2 | 329 | - | - | |
| Cmo14g01075 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 8 | 324 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmo02g01297 | Cmo-Chr2:7707174 | Cmo14g01075 | Cmo-Chr14:5965793 | 3.08E-108 | dispersed | |
| Cmo09g00017 | Cmo-Chr9:114350 | Cmo14g01075 | Cmo-Chr14:5965793 | 6.63E-94 | dispersed | |
| Cmo13g00035 | Cmo-Chr13:227262 | Cmo14g01075 | Cmo-Chr14:5965793 | 1.15E-89 | dispersed | |
| Cmo14g01075 | Cmo-Chr14:5965793 | Cmo17g00865 | Cmo-Chr17:7944762 | 0 | dispersed | |
| Cmo20g00686 | Cmo-Chr20:3384355 | Cmo14g01075 | Cmo-Chr14:5965793 | 5.98E-68 | dispersed | |
| Cmo14g01074 | Cmo-Chr14:5943038 | Cmo14g01075 | Cmo-Chr14:5965793 | 0 | tandem | |
| Cmo14g01075 | Cmo-Chr14:5965793 | Cmo14g01076 | Cmo-Chr14:5989799 | 0 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmo14g01075 | K09753 | - | csv:116401652 | 578.941 |