Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01087 ATGTGGGTTCTTATGGCTATCATTTTTGGTATGAGTATCATAACCTGCCTCCATGCCTTGATAAAATCCAAATATAATGCAAAACTTCCAAAAGGTTCAATGGGTTTCCCCATTCTTGGTGAAACAAACCACTTCTTTGCTCCCAATCCATCATTCGACGTATCTCCTTTCATCAAAGACAGAGTTCTCAAGTATGGACCCATTTTCAAAACAAGTTTAGTGGGGAAACCATTGATTATCTCAACAGATCCTGACCTAAACTATCTCATATTCGAACAAGAGGAAACATTGTTCGAATGTTGGTATCCAGAGACCTTCAAAAAGATATTTGGAGATCAATTCTTCGGATCCTTGCATGGCTTCATGCATAAGTATCTCAAGAACATGATTGTTAACGCTTTTGGAATTGAATGTTTGAAAAGTATGGTTTCTGAAGTTGAAGCTGCAGCAACTACAAGATTAAGAAGATGGGCATCTTGTAAAGTAGTTGAATTGAAGGATGAAATTGCAAATGGTTTGGTGTCTTTCCCTCTTGATATTCCTGGAACGGCTTATCATAAATGCTTACGGGGTAGAAAAAGAGTGATGAGGATGCTGGAAAACATGTTAGAAGAAAGGCAGCAAAATCCAAGGAAACAAAATGTTGATTTTTTTGACTTTGTTCTTCAAGAACTTCAAAAGGATGGAACACCTCTCACTAAAGAAATCGCTTTGGATTTGATCTTTTTGCTTCTTTTTGCTAGCTATGAAACCACTTCCATTGCTTTAACTTTAGCTATCAAATTTCTCCTAGATCATCCCCACGTCTTGACCCAATTAACTGAAGAACATGAGGGAATTTTGAAGAACAGGAAAGATAAAGCTTCTGGGATTACTTGGAATGAATACAAATCCATGACATTTACATTCAAGGTGAAGGAAGAATTAATTATAAAATTCTTTTTTTTGAATGAGACATTGAGGCTGGCTAATATTGCTCCTGGGATCTTTCGAAGAGCATTGAGAGACGTTGAGTTTAAGGGAATTACCATCCCGGCGGGATGGGGTGTCATGGTGTGTCCTCCAGCTATCCATTTGGATCCAAAGCATTATGTTGACCCACTTGCCTTCAACCCATGGCGGTGGGAGAGATGTGAAGGGGCATCGAGGCATTTCATTGCTTTTGGAAGGGGCTTGAGATTTTGCATTGGTGCAGACTTTGCCAAATTGCAGATGGCTGTGTTTCTCCATAACTTGGTTACCAAGTACAGGTTCAAAGCAATTGGAGGAGGTAATATTGTTCGAACCCCAGGCGTACAGTTTCCTGATGGCTTTCACGTTGAGATCGTGGAGAAAGAGAAGAAGCCCTCCAAATACTAA 1359 39.59 MWVLMAIIFGMSIITCLHALIKSKYNAKLPKGSMGFPILGETNHFFAPNPSFDVSPFIKDRVLKYGPIFKTSLVGKPLIISTDPDLNYLIFEQEETLFECWYPETFKKIFGDQFFGSLHGFMHKYLKNMIVNAFGIECLKSMVSEVEAAATTRLRRWASCKVVELKDEIANGLVSFPLDIPGTAYHKCLRGRKRVMRMLENMLEERQQNPRKQNVDFFDFVLQELQKDGTPLTKEIALDLIFLLLFASYETTSIALTLAIKFLLDHPHVLTQLTEEHEGILKNRKDKASGITWNEYKSMTFTFKVKEELIIKFFFLNETLRLANIAPGIFRRALRDVEFKGITIPAGWGVMVCPPAIHLDPKHYVDPLAFNPWRWERCEGASRHFIAFGRGLRFCIGADFAKLQMAVFLHNLVTKYRFKAIGGGNIVRTPGVQFPDGFHVEIVEKEKKPSKY 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 6166390 6169981 - CmoCh14G010870.1 Cmo14g01087 396353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01087 452 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS P450 superfamily signature 247 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS P450 superfamily signature 386 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS P450 superfamily signature 395 406 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 Gene3D Cytochrome P450 20 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PANTHER CYTOCHROME P450 26 11 170 - -
Cmo14g01087 452 Pfam Cytochrome P450 176 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PANTHER CYTOCHROME P450 26 170 441 - -
Cmo14g01087 452 SUPERFAMILY Cytochrome P450 25 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 385 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 236 253 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 256 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 395 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cmo14g01087 452 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 388 397 IPR017972 GO:0005506|GO:0016705
Cmo14g01087 452 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 11 170 - -
Cmo14g01087 452 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 170 441 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo06g00736 Cmo-Chr6:3799712 Cmo14g01087 Cmo-Chr14:6166390 9.71E-178 dispersed
Cmo08g00035 Cmo-Chr8:183408 Cmo14g01087 Cmo-Chr14:6166390 5.56E-109 dispersed
Cmo14g01087 Cmo-Chr14:6166390 Cmo15g00235 Cmo-Chr15:1161724 1.34E-77 dispersed
Cmo14g01087 Cmo-Chr14:6166390 Cmo16g01056 Cmo-Chr16:7421563 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01087 - - cmos:111442183 873.618