Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01118 ATGAACTCAACTTTGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACATCATATGAGGACAACATAAAAAAGATTGTGGACTTTAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCATTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCCAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGTCGATTTTGGGAAGATTTGGTTCTCGCATTAGTGGGGGACCAGCTTGATTTCGGTGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAATGAGGATATTTTGAGTGTCTGGAACCGCAATGCATCTGATCATCAGGCAGTGATGGGTCTGCGAGATTCGATCAAACGACACTTAAAGCTCCCACATGGGTATGTTATGGAATACAAACCCCACGATGCATCTCTGCGTGATAACTCATCATACAGAAACACATGGTTGCGAGGGACAAAACTTGGCTCCACACTTCGATTTTAA 573 43.98 MNSTLHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGTKLGSTLRF 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 7593714 7595922 - CmoCh14G011180.1 Cmo14g01118 396384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01118 190 PANTHER BNAA10G16710D PROTEIN 6 181 - -
Cmo14g01118 190 Gene3D RNA Cap, Translation Initiation Factor Eif4e 3 174 IPR023398 -
Cmo14g01118 190 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 6 181 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo14g01118 190 Pfam Eukaryotic initiation factor 4E 6 161 IPR001040 GO:0003723|GO:0003743|GO:0006413
Cmo14g01118 190 ProSitePatterns Eukaryotic initiation factor 4E signature. 59 82 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Cmo14g01118 190 SUPERFAMILY eIF4e-like 6 177 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01118 Cmo-Chr14:7593714 Cmo17g00144 Cmo-Chr17:812362 1.83E-28 dispersed
Cmo14g01118 Cmo-Chr14:7593714 Cmo13g00599 Cmo-Chr13:6626533 1.76E-30 transposed
Cmo14g01118 Cmo-Chr14:7593714 Cmo18g00422 Cmo-Chr18:2777211 5.21E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01118 K03259 - csv:101204290 374.015