Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmo14g01155 | ATGGGGGCGATTTGGGCGGTTTCAATCGCGCAGATGCTGCTATTTTTGGCTTTCTTCCATTTGGCCGCTTCCTATACTGATTCCCGCGATGCTACAGTTCTTCGAGCTCTGAAAGATGATTGGCAAAATACACCACCAAGCTGGGGTGCATCAAATGATCCCTGTGGAGCCCCCTGGGAAGGAGTTCTTTGCAACAATTCAAGAGTCGTTGCATTGAGATTATCTAGTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTTACTGAACTTAAATCATTGGACCTTTCAGCGAATCGAGGCCTCATTGGTTCAATCTCCCGGGCGCTTGGGAATTTGCTGAAATTGGATACCTTGAGCCTTTCTGCGTGTGGATTTAGTGGTACAATTCCGGAAGAACTAGGCAATCTTACTGAGCTAACCTTCTTGTCTTTATATTCAAACAATTTCTCTGGAACCATACCGGCTACTCTAGGAAAACTCTCCAAACTCTACTGGCTAGACCTGGCAGATAATAAGTTGACTGGTGCTCTTCCAGTTTCCACTTCCGAATCTCCGGGTTTAGATCAACTTTCTGGGGCTAAACATTTTCATTTCAGCAAAAACAAGCTGTCAGGAGCCATTCCACCTGAACTTTTTAGCTCTGAGATGGAATTATTACACATATTATTTGACGGGAATAATTTTTCTGGGAGTATCCCACCAACATTAGGACTTGTTCAGTCCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGCAATGTCCCATCAACTCTGAGCAACCTAATTAATATCAATGCATTGCATTTGGCCAACAATAAGCTAACAGGTCCACTACCAAACTTTACTCAAATGAGTTCACTAAGTCACGTGGACCTTAGTAACAACTCATTTAACTCATCAGTAGCTCCGGAATGGTTCTCAACTCTACAATCTCTCACCACTCTTATTGTTGAATATGGGTCAATACGAGGAACTCTGCCAGAAGGAATCTTTATCTTACCACATATACAGCAAATAAAACTGAAGAACAATGCATTTGGTGGGACATTAATTATGGGTGACAGCATCAGCCAATCGTTGCAGCAAGTTGATTTGCAAAATAACGATATTTCCTCAGTTACCTCTCTTTCGGGATATACTAACACACTGATGCTGTCGGGAAATCCTGTGTGTAAAACTAGTGTCCTCTCAAATACGAACTATTGCCACCTTCAACAGCAACAAACAAAACCATATTCTACGAGCCTTGTCAATTGTGGTAGTAAGTCATGTTCTCCTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACCTTATACTTTAAAGGATCCTCTTTCCGGGAATTGTCCAATATAACTCTATTTCACTCATTGGAAACGAGCCTTTTTAAAACTTTCAACAGCACGCCTTTTATTCAAAGCCCTTTCGTTAATATTGATGATTATCTTCAGATACAACTTGCACTTTTTCCATCCCACGATAAGTATTTCAGTAGGGAAGACATCCAGAAAATTGGGTTTGAATTGTACCATCATAATTTCCAGCCTCCCGATATGTTTGGGCCATACACTTTCAATGCATCTCCTTATCATTTTCCAGCCATCAATGGGGGATCAGATTCAACGAACACCAGAATGGTAATTGGAATAGCTGTTGGCTCTGCCTTTCTTGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCCAGCCACATGGAAACGATAGTGGAGATGCGCCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAACAATGCACAAATAATTTCTCCACGAGTAACGTGATAGGATCCGGAGGATTTGGCATGGTATACAGAGGAACGCTGAAGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACAGAAATTGAGCTTCTTTCACGAGTTCATCACAAGAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAGATTCTTGTTTATGAATTCATGCCTAATGGGACACTTAGAGAGAGCCTATCTGGAAAATCGGGTATTTATCTTGATTGGAAGAGAAGACTTCGTATCGCACTTGGGTCGGCCAGAGGCCTGACTTACTTACATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACGTTTAAATGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTCAGACAGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGTACAATGGGTTATTTGGATCCTGAATATTACATGAGTGAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAATAGTTATGTTGGAATTGATAACTGCTAAGCTGCCAATTGAGAAAGGAAAGCACATAGTTCGTGAGGTGCGTACGTTGATGAATAAGAGTGATGAAAAATATTATGGTTTGAAGGATATAATGGATAAATCCATCATCGTTAATACAACAAATCTTATTGGGTTCGGAAGGTTCTTAGAGTTGGGCATGCAATGTGTTGAAGAGGCAGCTGCAGAGCGTCCCACAATGAGTGATGTGGTTAAGGCAATTGAGAGCATTTTGCAGAATGATGGAATCAATACAAGCTCAACCTCAGCATCCTCATCCGCCACAGACTTTGGGGCTTCCAAAGTTGCTTCCAGACATCCTTATAATGATGCTATACTCAAAGAGGGTGTCAACAGCCAATGA | 2814 | 41.61 | MGAIWAVSIAQMLLFLAFFHLAASYTDSRDATVLRALKDDWQNTPPSWGASNDPCGAPWEGVLCNNSRVVALRLSSMGLKGKLGGDIGGLTELKSLDLSANRGLIGSISRALGNLLKLDTLSLSACGFSGTIPEELGNLTELTFLSLYSNNFSGTIPATLGKLSKLYWLDLADNKLTGALPVSTSESPGLDQLSGAKHFHFSKNKLSGAIPPELFSSEMELLHILFDGNNFSGSIPPTLGLVQSLEVLRLDRNSLTGNVPSTLSNLININALHLANNKLTGPLPNFTQMSSLSHVDLSNNSFNSSVAPEWFSTLQSLTTLIVEYGSIRGTLPEGIFILPHIQQIKLKNNAFGGTLIMGDSISQSLQQVDLQNNDISSVTSLSGYTNTLMLSGNPVCKTSVLSNTNYCHLQQQQTKPYSTSLVNCGSKSCSPDEKLNPQSCECAYPYEGTLYFKGSSFRELSNITLFHSLETSLFKTFNSTPFIQSPFVNIDDYLQIQLALFPSHDKYFSREDIQKIGFELYHHNFQPPDMFGPYTFNASPYHFPAINGGSDSTNTRMVIGIAVGSAFLVLCLIGVGTYAIQQKRRAEKAQPHGNDSGDAPQLKGARWFSYDELKQCTNNFSTSNVIGSGGFGMVYRGTLKDGKVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRESLSGKSGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDERLNAKVADFGLSKLVSDSGKGHVSTQVKGTMGYLDPEYYMSEQLTEKSDVYSFGIVMLELITAKLPIEKGKHIVREVRTLMNKSDEKYYGLKDIMDKSIIVNTTNLIGFGRFLELGMQCVEEAAAERPTMSDVVKAIESILQNDGINTSSTSASSSATDFGASKVASRHPYNDAILKEGVNSQ | 937 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
14 | 9107560 | 9113857 | + | CmoCh14G011550.1 | Cmo14g01155 | 396421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmo14g01155 | 937 | ProSiteProfiles | Leucine-rich repeat profile. | 364 | 385 | IPR001611 | GO:0005515 | |
Cmo14g01155 | 937 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 740 | 752 | IPR008271 | GO:0004672|GO:0006468 | |
Cmo14g01155 | 937 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 8 | 924 | - | - | |
Cmo14g01155 | 937 | PANTHER | LRR RECEPTOR-LIKE KINASE | 8 | 924 | - | - | |
Cmo14g01155 | 937 | Gene3D | Phosphorylase Kinase; domain 1 | 592 | 695 | - | - | |
Cmo14g01155 | 937 | SMART | serkin_6 | 620 | 874 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g01155 | 937 | Gene3D | Ribonuclease Inhibitor | 28 | 184 | IPR032675 | - | |
Cmo14g01155 | 937 | Gene3D | Transferase(Phosphotransferase) domain 1 | 696 | 920 | - | - | |
Cmo14g01155 | 937 | ProSiteProfiles | Protein kinase domain profile. | 620 | 895 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cmo14g01155 | 937 | SUPERFAMILY | L domain-like | 53 | 404 | - | - | |
Cmo14g01155 | 937 | Gene3D | Ribonuclease Inhibitor | 185 | 288 | IPR032675 | - | |
Cmo14g01155 | 937 | Gene3D | Ribonuclease Inhibitor | 289 | 389 | IPR032675 | - | |
Cmo14g01155 | 937 | Pfam | Leucine rich repeat N-terminal domain | 29 | 65 | IPR013210 | - | |
Cmo14g01155 | 937 | CDD | STKc_IRAK | 626 | 894 | - | - | |
Cmo14g01155 | 937 | SUPERFAMILY | Protein kinase-like (PK-like) | 606 | 903 | IPR011009 | - | |
Cmo14g01155 | 937 | Pfam | Protein tyrosine and serine/threonine kinase | 622 | 889 | IPR001245 | GO:0004672|GO:0006468 | |
Cmo14g01155 | 937 | ProSitePatterns | Protein kinases ATP-binding region signature. | 626 | 648 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmo13g00001 | Cmo-Chr13:22044 | Cmo14g01155 | Cmo-Chr14:9107560 | 3.97E-162 | dispersed | |
Cmo14g00001 | Cmo-Chr14:550 | Cmo14g01155 | Cmo-Chr14:9107560 | 5.17E-56 | dispersed | |
Cmo14g01155 | Cmo-Chr14:9107560 | Cmo20g01028 | Cmo-Chr20:8825713 | 0 | dispersed | |
Cmo14g02112 | Cmo-Chr14:15291363 | Cmo14g01155 | Cmo-Chr14:9107560 | 1.17E-73 | dispersed | |
Cmo14g01155 | Cmo-Chr14:9107560 | Cmo06g00168 | Cmo-Chr6:914044 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
74848 | PF07714 | PK_Tyr_Ser-Thr | 1.50E-45 | CL0016 | Cmo | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmo14g01155 | - | - | bhj:120091485 | 1486.09 |