Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01155 ATGGGGGCGATTTGGGCGGTTTCAATCGCGCAGATGCTGCTATTTTTGGCTTTCTTCCATTTGGCCGCTTCCTATACTGATTCCCGCGATGCTACAGTTCTTCGAGCTCTGAAAGATGATTGGCAAAATACACCACCAAGCTGGGGTGCATCAAATGATCCCTGTGGAGCCCCCTGGGAAGGAGTTCTTTGCAACAATTCAAGAGTCGTTGCATTGAGATTATCTAGTATGGGCCTAAAAGGTAAACTTGGTGGTGACATTGGAGGCCTTACTGAACTTAAATCATTGGACCTTTCAGCGAATCGAGGCCTCATTGGTTCAATCTCCCGGGCGCTTGGGAATTTGCTGAAATTGGATACCTTGAGCCTTTCTGCGTGTGGATTTAGTGGTACAATTCCGGAAGAACTAGGCAATCTTACTGAGCTAACCTTCTTGTCTTTATATTCAAACAATTTCTCTGGAACCATACCGGCTACTCTAGGAAAACTCTCCAAACTCTACTGGCTAGACCTGGCAGATAATAAGTTGACTGGTGCTCTTCCAGTTTCCACTTCCGAATCTCCGGGTTTAGATCAACTTTCTGGGGCTAAACATTTTCATTTCAGCAAAAACAAGCTGTCAGGAGCCATTCCACCTGAACTTTTTAGCTCTGAGATGGAATTATTACACATATTATTTGACGGGAATAATTTTTCTGGGAGTATCCCACCAACATTAGGACTTGTTCAGTCCCTTGAGGTTCTTCGACTTGATCGAAATTCTTTAACAGGCAATGTCCCATCAACTCTGAGCAACCTAATTAATATCAATGCATTGCATTTGGCCAACAATAAGCTAACAGGTCCACTACCAAACTTTACTCAAATGAGTTCACTAAGTCACGTGGACCTTAGTAACAACTCATTTAACTCATCAGTAGCTCCGGAATGGTTCTCAACTCTACAATCTCTCACCACTCTTATTGTTGAATATGGGTCAATACGAGGAACTCTGCCAGAAGGAATCTTTATCTTACCACATATACAGCAAATAAAACTGAAGAACAATGCATTTGGTGGGACATTAATTATGGGTGACAGCATCAGCCAATCGTTGCAGCAAGTTGATTTGCAAAATAACGATATTTCCTCAGTTACCTCTCTTTCGGGATATACTAACACACTGATGCTGTCGGGAAATCCTGTGTGTAAAACTAGTGTCCTCTCAAATACGAACTATTGCCACCTTCAACAGCAACAAACAAAACCATATTCTACGAGCCTTGTCAATTGTGGTAGTAAGTCATGTTCTCCTGATGAGAAGCTGAACCCTCAGAGTTGTGAATGTGCCTATCCATATGAAGGGACCTTATACTTTAAAGGATCCTCTTTCCGGGAATTGTCCAATATAACTCTATTTCACTCATTGGAAACGAGCCTTTTTAAAACTTTCAACAGCACGCCTTTTATTCAAAGCCCTTTCGTTAATATTGATGATTATCTTCAGATACAACTTGCACTTTTTCCATCCCACGATAAGTATTTCAGTAGGGAAGACATCCAGAAAATTGGGTTTGAATTGTACCATCATAATTTCCAGCCTCCCGATATGTTTGGGCCATACACTTTCAATGCATCTCCTTATCATTTTCCAGCCATCAATGGGGGATCAGATTCAACGAACACCAGAATGGTAATTGGAATAGCTGTTGGCTCTGCCTTTCTTGTTCTATGCCTCATTGGAGTTGGAACATATGCAATTCAACAAAAGAGACGTGCAGAAAAGGCCCAGCCACATGGAAACGATAGTGGAGATGCGCCACAATTAAAGGGAGCCAGATGGTTTTCTTATGATGAACTTAAACAATGCACAAATAATTTCTCCACGAGTAACGTGATAGGATCCGGAGGATTTGGCATGGTATACAGAGGAACGCTGAAGGATGGAAAAGTAGTTGCAATCAAAAGAGCTCAACAAGGATCAATGCAGGGTGGCCTTGAGTTCAAGACAGAAATTGAGCTTCTTTCACGAGTTCATCACAAGAATCTTCTAGGCCTAGTGGGATTTTGTTCCGAACAAGGAGAACAGATTCTTGTTTATGAATTCATGCCTAATGGGACACTTAGAGAGAGCCTATCTGGAAAATCGGGTATTTATCTTGATTGGAAGAGAAGACTTCGTATCGCACTTGGGTCGGCCAGAGGCCTGACTTACTTACATGAGCTTGCTAATCCTCCCATAATCCATAGAGATATTAAGTCCACCAACATTTTACTAGATGAACGTTTAAATGCAAAGGTTGCAGATTTTGGCTTGTCCAAGCTCGTCTCAGACAGTGGAAAGGGACATGTTTCTACTCAAGTCAAAGGTACAATGGGTTATTTGGATCCTGAATATTACATGAGTGAACAATTGACTGAGAAAAGTGATGTATACAGCTTTGGAATAGTTATGTTGGAATTGATAACTGCTAAGCTGCCAATTGAGAAAGGAAAGCACATAGTTCGTGAGGTGCGTACGTTGATGAATAAGAGTGATGAAAAATATTATGGTTTGAAGGATATAATGGATAAATCCATCATCGTTAATACAACAAATCTTATTGGGTTCGGAAGGTTCTTAGAGTTGGGCATGCAATGTGTTGAAGAGGCAGCTGCAGAGCGTCCCACAATGAGTGATGTGGTTAAGGCAATTGAGAGCATTTTGCAGAATGATGGAATCAATACAAGCTCAACCTCAGCATCCTCATCCGCCACAGACTTTGGGGCTTCCAAAGTTGCTTCCAGACATCCTTATAATGATGCTATACTCAAAGAGGGTGTCAACAGCCAATGA 2814 41.61 MGAIWAVSIAQMLLFLAFFHLAASYTDSRDATVLRALKDDWQNTPPSWGASNDPCGAPWEGVLCNNSRVVALRLSSMGLKGKLGGDIGGLTELKSLDLSANRGLIGSISRALGNLLKLDTLSLSACGFSGTIPEELGNLTELTFLSLYSNNFSGTIPATLGKLSKLYWLDLADNKLTGALPVSTSESPGLDQLSGAKHFHFSKNKLSGAIPPELFSSEMELLHILFDGNNFSGSIPPTLGLVQSLEVLRLDRNSLTGNVPSTLSNLININALHLANNKLTGPLPNFTQMSSLSHVDLSNNSFNSSVAPEWFSTLQSLTTLIVEYGSIRGTLPEGIFILPHIQQIKLKNNAFGGTLIMGDSISQSLQQVDLQNNDISSVTSLSGYTNTLMLSGNPVCKTSVLSNTNYCHLQQQQTKPYSTSLVNCGSKSCSPDEKLNPQSCECAYPYEGTLYFKGSSFRELSNITLFHSLETSLFKTFNSTPFIQSPFVNIDDYLQIQLALFPSHDKYFSREDIQKIGFELYHHNFQPPDMFGPYTFNASPYHFPAINGGSDSTNTRMVIGIAVGSAFLVLCLIGVGTYAIQQKRRAEKAQPHGNDSGDAPQLKGARWFSYDELKQCTNNFSTSNVIGSGGFGMVYRGTLKDGKVVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLLGLVGFCSEQGEQILVYEFMPNGTLRESLSGKSGIYLDWKRRLRIALGSARGLTYLHELANPPIIHRDIKSTNILLDERLNAKVADFGLSKLVSDSGKGHVSTQVKGTMGYLDPEYYMSEQLTEKSDVYSFGIVMLELITAKLPIEKGKHIVREVRTLMNKSDEKYYGLKDIMDKSIIVNTTNLIGFGRFLELGMQCVEEAAAERPTMSDVVKAIESILQNDGINTSSTSASSSATDFGASKVASRHPYNDAILKEGVNSQ 937
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9107560 9113857 + CmoCh14G011550.1 Cmo14g01155 396421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01155 937 ProSiteProfiles Leucine-rich repeat profile. 364 385 IPR001611 GO:0005515
Cmo14g01155 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 740 752 IPR008271 GO:0004672|GO:0006468
Cmo14g01155 937 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 924 - -
Cmo14g01155 937 PANTHER LRR RECEPTOR-LIKE KINASE 8 924 - -
Cmo14g01155 937 Gene3D Phosphorylase Kinase; domain 1 592 695 - -
Cmo14g01155 937 SMART serkin_6 620 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01155 937 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Cmo14g01155 937 Gene3D Transferase(Phosphotransferase) domain 1 696 920 - -
Cmo14g01155 937 ProSiteProfiles Protein kinase domain profile. 620 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01155 937 SUPERFAMILY L domain-like 53 404 - -
Cmo14g01155 937 Gene3D Ribonuclease Inhibitor 185 288 IPR032675 -
Cmo14g01155 937 Gene3D Ribonuclease Inhibitor 289 389 IPR032675 -
Cmo14g01155 937 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cmo14g01155 937 CDD STKc_IRAK 626 894 - -
Cmo14g01155 937 SUPERFAMILY Protein kinase-like (PK-like) 606 903 IPR011009 -
Cmo14g01155 937 Pfam Protein tyrosine and serine/threonine kinase 622 889 IPR001245 GO:0004672|GO:0006468
Cmo14g01155 937 ProSitePatterns Protein kinases ATP-binding region signature. 626 648 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo13g00001 Cmo-Chr13:22044 Cmo14g01155 Cmo-Chr14:9107560 3.97E-162 dispersed
Cmo14g00001 Cmo-Chr14:550 Cmo14g01155 Cmo-Chr14:9107560 5.17E-56 dispersed
Cmo14g01155 Cmo-Chr14:9107560 Cmo20g01028 Cmo-Chr20:8825713 0 dispersed
Cmo14g02112 Cmo-Chr14:15291363 Cmo14g01155 Cmo-Chr14:9107560 1.17E-73 dispersed
Cmo14g01155 Cmo-Chr14:9107560 Cmo06g00168 Cmo-Chr6:914044 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74848 PF07714 PK_Tyr_Ser-Thr 1.50E-45 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01155 - - bhj:120091485 1486.09