Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01164 ATGGGTTCCTCTTCGTCTTCTTTTTCAGTTATCAAATGGTTCTCCTTCTGCAGACCTACCTCTTCGATACTTCTTTTTCTTTACTGCATGCTCTTCTTCTTTCATACTGAAGCTATTTTGGGCGATTCAGACAAATCCGTGCTTCTTCAGTTCAAAAATGCTGTTTCCGACCCTTCCGGCTTGCTCTCCACCTGGACTTCCAGTTCTTCTGATTACTGCTTGTGGTTTGGCGTTTCGTGCGACCTCAATTCTCGGGTTGTGTCGCTCAACATTTCCGGGAATGGTGGTGCAGGTAATTTGAATGCATTTTCCTGCTCTGACTCTTCTAAATTTCCTCTTTATGGGTTTGGAATCAGGAGGGGTTGTGTTGGTAATAGAGGCTCACTGATGGGGAAGCTTCCGACGGTGATTGGGAAGCTCACTGAGCTGAGGACTTTGTCTCTTGCGTTTCATGGTTTTGAGGGTGAACTTCCGGCTGAAATCTTGGGATTGGAGAACCTTGAGGTTCTTGATCTTGAAGGAAACTCTTTAACTGGACTGCTTAATAATGATTTTGTCAGGCTGCGCAAGTTGCGCATTCTCAATCTTGGATTTAATAGGCTTACTGGTGAGATTTCTAGCTCGCTTTCTGGTTGTGCAAGTTTAGAGGTCATGAATTTAGCTGGGAATCAGTTGAATGGCACACTTCCACCGTTTGTTGGTCGGTTGAGAGGGGTCTACTTGTCTTTCAATTTTTTTACAGGATCCATTCCAAGTGAGCTTGGGATTAACTGTCAGCTTGAGCATCTTGACCTGTCTGGTAATTTTTTGGTCAGTGGGATTCCAGGTAGTTTGGGGAATTGCGGTCAGTTGCAGACATTGTTGCTGTACTCCAACATGCTGGAGGAGGCCATTCCAGCTGGATTTGGTAAGTTGCAGAAGCTGGAACTGCTTGATCTTTCTAGGAATAGTCTCAGTGGTCCAATACCCTCTGAGCTCGGAAACTGCTTGCAGTTGTCTGTCCTCGTGCTCTCGAATCTCTTCGATCCAATTCCCAAGATCAACTACACAGACAAAGACTCCCCAACTGAGGAACTTAGTGATGATAGTTTTAACTATTTTTCCGGCAGTATACCTGAGTCGATTACAACCCTTCCAAAGCTGAGGATATTGTGGGCCCCTAGTGCAAACCTTAATGGAAGATTCCCTTCCCAATGGGGTAAGTGTGAAAACTTGGAGATGGTCAACTTAGCGGGTAATTATCTTTACGGGGAGCTTCCAAGTGGATTTAGCGTCTGCAAAAAAATTCAAGTTCTTGATTTAAGCATGAACCGGCTTTCTGGAGAACTTGATAAAAACCTTCCTGTTCCTTACATGAATCTGTTTGATATTAGCGGTAATCTCTTAACTGGTGAGATTCCTATGGTCTGTGGCCATGATTGCTCACTGCCAATGCCCCATTCAAACAGATATTTGGATGTTGAGGATGTGTCGTCTCGGTATCTTGCATTTTTTGCCACTAGTATTCGAGGTGCAACGCCTTTTAAATTTCTTGGAAATGATAATCTGATAATGCATAACTTTGGGGACAATAACTTTACTGGCAGTCTTCTGTCGCTACCATTTCCACGTGAAAGAATGGGAAGAAAAACTGTTTATGCTTATCTTGTAGGTGGAAATAAGCTGACTGGACGATTTCCTGATAGTTTGTTTGAAATATGCGATGGTTTGGCGGGATTGATCTTCAATATTAGCAGCAATAAAATCTCTGGTCCATTTTCTGTGGAAATTGGTAAAAAGTGTGGTTCTCTCAAATTCTTGGATGCATCTGGTAATCAGATGACTGGGCAGGTACCTGCTAGCTTTGGAGAGCTATTATCTCTGAATCATCTGAACCTAAGCAGGAACAAGTTTCAGTATCAAATACCGACTTCTCTCGGACATATAGCTGATTTGAAGTACCTTTGTTTGGCTGGCAATAACTTTAATGGTTCTATACCTTCTACATTGGGAAAGTTGCAGTCTTTGGAGTTGCTGGATCTTTCACGTAACGATCTTTCGGGTGAAATTCCAGTTGATCTTGTTAACTTGAGAGGCCTAAAAGTTCTACTTCTCAATAATAATTCACTCTCTGGACCGGTTCCCTCTGGTTTGGCAAATGTTACCACACTCTCTGCATTTAATGTGTCATTCAATAACTTGTCTGGTTCCTTACCATCAAATAATAACATGATCAAATGTAGTGGTGCGATTGGAAATCCTTACCTCCGCCCGTGCCATTTGTTTTCTCTGGCCGTGCCCTCATCTGGAATGCAAGGTTCAGAAGGCGACCCGAGTAGTCTTGCAGCTTCACCATCTGGTGTTGCACCCCAAACAAGTGGAGGTGGCAGCTTCAATTCAATTGAGATAGCATCCATTACGTCTGCCTCTGCCATTGTTTCTGTTCTTATTGCTTTGATTATCCTTTTTATATATACACGAAAGTGGAACACGAAGTCTAAAGTTCTTGGATCAATGAGAAAGGAAGTGACGGTTTTTACTGATATTGGGGTTTCCCTGACGTTTGATAATGTAGTGCGTGCCACAAGTAATTTCAATGCAAGCAATTGCATTGGAAGTGGAGGATTTGGGGCAACTTACAAGGCAGAGATCGCGTTGGGAGTGCTCGTTGCAATAAAACGACTTGCTGTAGGTCGATTTCAAGGTGTCCAACAGTTTGATGCAGAAATTAAAACTCTTGGAAGGCTGCGCCATCCGAACCTTGTCACCTTAATTGGTTACCATGCCAGTGAAACAGAGATGTTCCTGATATATAATTATTTGCCAGGAGGCAATTTGGAAAAATTCATCCAGGAGAGGTCTACAAGAGCAGTTGATTGGAGAATTCTTCACAAGATTGCGCTGGACATAGCCCGTGCGCTTGCATATCTTCATGATCAGTGTGTACCACGAGTCCTCCACCGCGATGTGAAACCGAGCAATATACTATTAGACGATGATTTCAATGCTTATCTCTCTGACTTTGGATTGGCCAGGCTTCTTGGGACTTCTGAAACCCATGCTACCACAGGTGTGGCTGGAACTTTCGGCTATGTCGCTCCTGAATATGCCATGACGTGTCGTGTCTCTGATAAAGCAGACGTGTACAGTTACGGCGTGGTTCTTCTCGAGCTACTCTCAGACAAGAAAGCACTAGATCCCTCGTTTTCCTCGTACGGTAACGGTTTTAACATAGTAGCTTGGGCGTGTATGCTGCTTCGGCAGGGGCGAGCCAAGGAATTCTTCACAGCAGGGTTGTGGGAGGTAGGTCCCCATGATGATTTGGTTGAAGTATTACACTTGGCAGTTGTTTGTACAGTGGACTCTTTGTCGACTAGGCCAACGATGAAACTAGTCGTACGAAGGCTTAAGCAGCTTCAACCGCCATCGTGTTAG 3414 43.91 MGSSSSSFSVIKWFSFCRPTSSILLFLYCMLFFFHTEAILGDSDKSVLLQFKNAVSDPSGLLSTWTSSSSDYCLWFGVSCDLNSRVVSLNISGNGGAGNLNAFSCSDSSKFPLYGFGIRRGCVGNRGSLMGKLPTVIGKLTELRTLSLAFHGFEGELPAEILGLENLEVLDLEGNSLTGLLNNDFVRLRKLRILNLGFNRLTGEISSSLSGCASLEVMNLAGNQLNGTLPPFVGRLRGVYLSFNFFTGSIPSELGINCQLEHLDLSGNFLVSGIPGSLGNCGQLQTLLLYSNMLEEAIPAGFGKLQKLELLDLSRNSLSGPIPSELGNCLQLSVLVLSNLFDPIPKINYTDKDSPTEELSDDSFNYFSGSIPESITTLPKLRILWAPSANLNGRFPSQWGKCENLEMVNLAGNYLYGELPSGFSVCKKIQVLDLSMNRLSGELDKNLPVPYMNLFDISGNLLTGEIPMVCGHDCSLPMPHSNRYLDVEDVSSRYLAFFATSIRGATPFKFLGNDNLIMHNFGDNNFTGSLLSLPFPRERMGRKTVYAYLVGGNKLTGRFPDSLFEICDGLAGLIFNISSNKISGPFSVEIGKKCGSLKFLDASGNQMTGQVPASFGELLSLNHLNLSRNKFQYQIPTSLGHIADLKYLCLAGNNFNGSIPSTLGKLQSLELLDLSRNDLSGEIPVDLVNLRGLKVLLLNNNSLSGPVPSGLANVTTLSAFNVSFNNLSGSLPSNNNMIKCSGAIGNPYLRPCHLFSLAVPSSGMQGSEGDPSSLAASPSGVAPQTSGGGSFNSIEIASITSASAIVSVLIALIILFIYTRKWNTKSKVLGSMRKEVTVFTDIGVSLTFDNVVRATSNFNASNCIGSGGFGATYKAEIALGVLVAIKRLAVGRFQGVQQFDAEIKTLGRLRHPNLVTLIGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACMLLRQGRAKEFFTAGLWEVGPHDDLVEVLHLAVVCTVDSLSTRPTMKLVVRRLKQLQPPSC 1137
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9404275 9407688 + CmoCh14G011640.1 Cmo14g01164 396430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01164 1137 SUPERFAMILY L domain-like 551 752 - -
Cmo14g01164 1137 Gene3D Ribonuclease Inhibitor 41 234 IPR032675 -
Cmo14g01164 1137 ProSitePatterns Serine/Threonine protein kinases active-site signature. 978 990 IPR008271 GO:0004672|GO:0006468
Cmo14g01164 1137 Gene3D Transferase(Phosphotransferase) domain 1 934 1134 - -
Cmo14g01164 1137 ProSiteProfiles Protein kinase domain profile. 858 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01164 1137 SMART LRR_typ_2 666 690 IPR003591 -
Cmo14g01164 1137 SMART LRR_typ_2 188 212 IPR003591 -
Cmo14g01164 1137 SMART LRR_typ_2 305 329 IPR003591 -
Cmo14g01164 1137 SMART LRR_typ_2 618 642 IPR003591 -
Cmo14g01164 1137 SMART LRR_typ_2 258 281 IPR003591 -
Cmo14g01164 1137 SMART LRR_typ_2 164 187 IPR003591 -
Cmo14g01164 1137 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Cmo14g01164 1137 PRINTS Leucine-rich repeat signature 308 321 - -
Cmo14g01164 1137 PRINTS Leucine-rich repeat signature 666 679 - -
Cmo14g01164 1137 Pfam Protein kinase domain 861 1058 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01164 1137 SUPERFAMILY RNI-like 131 464 - -
Cmo14g01164 1137 ProSitePatterns Protein kinases ATP-binding region signature. 864 886 IPR017441 GO:0005524
Cmo14g01164 1137 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE RPK2 21 1136 - -
Cmo14g01164 1137 CDD STKc_IRAK 864 1132 - -
Cmo14g01164 1137 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 21 1136 - -
Cmo14g01164 1137 SMART serkin_6 858 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01164 1137 Gene3D Ribonuclease Inhibitor 481 749 IPR032675 -
Cmo14g01164 1137 Gene3D Ribonuclease Inhibitor 235 447 IPR032675 -
Cmo14g01164 1137 SUPERFAMILY Protein kinase-like (PK-like) 843 1129 IPR011009 -
Cmo14g01164 1137 Pfam Leucine Rich Repeat 307 329 IPR001611 GO:0005515
Cmo14g01164 1137 Pfam Leucine Rich Repeat 259 281 IPR001611 GO:0005515
Cmo14g01164 1137 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Cmo14g01164 1137 Gene3D Phosphorylase Kinase; domain 1 819 933 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo14g01164 Cmo-Chr14:9404275 Cmo15g00832 Cmo-Chr15:4220710 0 dispersed
Cmo01g00478 Cmo-Chr1:2280890 Cmo14g01164 Cmo-Chr14:9404275 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74850 PF00069 Pkinase 7.90E-43 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01164 - - csv:101218045 1925.6