Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01165 ATGTCGCGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCAGAACGATATGAGGAAATGGTTGAGTTCATGGAGAAAGTTGCGAAGACAGTGGATGTCGAGGAGATGACCGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGAAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGAGGAAATGAGGACCATGTCGCAATTATCAAGGATTACCGCAGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGGATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCCAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGGAAAGAAGCAGCTGAGAGCACACTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCTGAATTGGCTCCTACTCATCCAATTAGGCTCGGTCTTGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCGAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTCGACACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGATGAAGCTGGCGACGAGATTAAGGAAGCATCGAAACGTGAATCAGGGGAGGGCGGACAGTAG 774 46.77 MSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEEMTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRSKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGGQ 257
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 9444790 9447772 - CmoCh14G011650.1 Cmo14g01165 396431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01165 257 Coils Coil 9 29 - -
Cmo14g01165 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cmo14g01165 257 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cmo14g01165 257 PIRSF 14-3-3 1 245 IPR000308 -
Cmo14g01165 257 Pfam 14-3-3 protein 9 233 IPR023410 -
Cmo14g01165 257 Gene3D - 1 246 IPR036815 -
Cmo14g01165 257 PANTHER 14-3-3-LIKE PROTEIN GF14-F 2 252 - -
Cmo14g01165 257 SUPERFAMILY 14-3-3 protein 1 235 IPR036815 -
Cmo14g01165 257 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cmo14g01165 257 PANTHER 14-3-3 PROTEIN 2 252 IPR000308 -
Cmo14g01165 257 SMART 1433_4 3 246 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo01g01661 Cmo-Chr1:12565115 Cmo14g01165 Cmo-Chr14:9444790 2.77E-157 dispersed
Cmo05g00534 Cmo-Chr5:2590599 Cmo14g01165 Cmo-Chr14:9444790 1.17E-154 dispersed
Cmo05g00585 Cmo-Chr5:2895035 Cmo14g01165 Cmo-Chr14:9444790 3.41E-136 dispersed
Cmo09g00555 Cmo-Chr9:2651002 Cmo14g01165 Cmo-Chr14:9444790 7.43E-160 dispersed
Cmo12g00129 Cmo-Chr12:795393 Cmo14g01165 Cmo-Chr14:9444790 1.67E-161 dispersed
Cmo12g00144 Cmo-Chr12:908622 Cmo14g01165 Cmo-Chr14:9444790 2.78E-129 dispersed
Cmo01g00475 Cmo-Chr1:2267892 Cmo14g01165 Cmo-Chr14:9444790 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01165 K06630 - csv:101222068 488.804