Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01189 ATGATTACAAATTCTAAAGAAGAGAATTCCCCTCCAAAACTAGTAGCTTCATCAAGCTCATCGGCGGCGCTGGCAACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACATAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCGACTGCAATTCAGCTCTATGATCTTCAGGACCGCCTCGGCCTTAATCAGCCAAGCAAGGTCGTCGACTGGCTGCTCAACGTCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATACCATCTGCAAGCCTCGGCCTTCACTACCAATCTATGCTACCACCTCATATAGCACATAGATCGGAGTTCAAAATCAACTCCGGCATCGACAAGGTCGAAATCGACGACGATGACGAACAAAAGCAACACAAATCCAATTCTAATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTCCATTGGGATCCCTCCTCCTCCTCCTCCTCCTCGTCGTCGTCGTCAACAACAAATCTTCCCTTCTTTACATCTCAAGCTGAGGATCTTCATAACTTCAATCATGTCACCCCTTTGTCACTCTCAACTGGCTCTCAGTTCTTGGAGTTCAACAATCACTTGCACCAAAATTTCTTCATTAACAACTCTTTGAATACACCTCCTCCTATGCACTCAATAACCCACCCCGCTGTTAGGCCTTTTCATTTCAGCATGGCTACCAAATTTGTTGCTCAACATAAGAATAACAATGGAGATCCTGCCAATAAAGAGGACGGCTTCGGTTCTGATGAATGA 855 47.6 MITNSKEENSPPKLVASSSSSAALATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLPIPSASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHKSNSNPSSFSALLNNVSAPPFGFHWDPSSSSSSSSSSSTTNLPFFTSQAEDLHNFNHVTPLSLSTGSQFLEFNNHLHQNFFINNSLNTPPPMHSITHPAVRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10009759 10010613 + CmoCh14G011890.1 Cmo14g01189 396455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01189 284 ProSiteProfiles TCP domain profile. 45 103 IPR017887 -
Cmo14g01189 284 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 2 152 - -
Cmo14g01189 284 Pfam TCP family transcription factor 45 144 IPR017887 -
Cmo14g01189 284 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 152 IPR005333 GO:0003700
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo03g01407 Cmo-Chr3:10238225 Cmo14g01189 Cmo-Chr14:10009759 3.98E-29 dispersed
Cmo07g00094 Cmo-Chr7:565129 Cmo14g01189 Cmo-Chr14:10009759 6.27E-30 dispersed
Cmo10g00314 Cmo-Chr10:1404121 Cmo14g01189 Cmo-Chr14:10009759 5.85E-43 dispersed
Cmo11g00214 Cmo-Chr11:1068115 Cmo14g01189 Cmo-Chr14:10009759 6.48E-42 dispersed
Cmo14g01189 Cmo-Chr14:10009759 Cmo18g00457 Cmo-Chr18:3034490 1.39E-23 dispersed
Cmo01g00439 Cmo-Chr1:2133762 Cmo14g01189 Cmo-Chr14:10009759 2.91E-85 wgd
Cmo13g01114 Cmo-Chr13:9110094 Cmo14g01189 Cmo-Chr14:10009759 2.91E-35 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
11011 PF03634 TCP 1.80E-26 No_clan Cmo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01189 - - csv:101216548 378.637