Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01203 ATGCCAACGGGCGTGCGCGTGGCGGGGCTTATGCGCGCACCGGCCCCAACAATCAGCGCCGCTTCTTCCCTCTTCCTCTTCCTCTACCTCTTCCTCTACCTCTCCTCCTCGTCGTTAGTGCTCGTCTTGTCTGCCCCATCCGACACCGAAACTCTGCTTGAATTCAAGCGCTCTTTGACCTCGGCCAGGGCTCTTAGAGATTGGAACCCCAAGGTCCCTCCTTGCAACAACAACAAGCCCAATTGGGCGGGCGTGCTGTGTTTGAATGGCCATGTTAGAGGGCTGCGGCTTGAGAATATGGGGCTTAAGGGGGAGGTTAATGTGGATCCCTTGGTTTCTTTGTCTCGTATGCGCACCCTGAGCTTCATGAACAATACCTTGGTTGGGCCTTGGCCTTCTGTTATTGGCAAACTACGCAATCTACGCTCCGTTTATCTTTCCTATAACCATTTTTCGGGTGCAATCCCGGACGATGCCTTCACGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCAAATTCCCTCATCTCTCGCTTCCCTGTCTAGGCTTATGGAATTGAGACTTGATGGAAACAAATTCAGAGGCCAAGTCCCCCGTCTTGAAATGCCTTCTTTGAAGAAACTTAATGTTTCCAACAATGAATTGGAAGGCCCAATTCCTCGTAGCTTAAGCCATATGGATCCTTCCTCCTTTGCAGGTAACCGTGATCTGTGTGGGGATCCACTTCCAGAATGCGAGAGAGCCCTAATTTCATCCGCAGGGCTACTCAAAATCGCAGTGATAGTCATAATTTTGGGGGTAACATTAGCAGTAATAGCTGCAATTTTCATCATAATGAATTTAAGGAGGCAGCCCGCCTTGCAATTAGGGAAGGGGAATCCCGGCGTTATAGAAGAGGATCAGAACAAATACATGAGTTCTAAGCCAACCACGGCGGTGGTTGGCGATGGATACAGATCGACGGAGTCGTCCGTAGCGCAGGCTAAAAGAGGTGCAGAACATGGGAAGCTATTATTTGTGAGAGACGACAGGGAGAAATTCGACTTACAAGACCTCCTCAGAGCATCCGCCGAAATCCTGGGCAGTGGCTCATTCGGCTCTTCCTACAAAGCAACAATACTCTGTAACGCCGTGGTTGTTAAGCGATACAAGCATATGAACAACGTAGGGAGAGAAGAGTTTCATGAACACATGAGACGCCTCGGCCGGTTGACGCATCCAAATCTACTCCCCTTGGTTGCTTATTACTACAGAAAAGAAGAGAAGCTCTTGATTTCGGATTTTGTAGATGAAGGGAGTTTGGCGAGCCATCTGCACGGCAACCACAACCTGGAGGAGCCAGGGATTGATTGGGCTACAAGATTGAAGATAATCAGAGGCATAGCAAGAGGAATGTCGTACCTCTACACATCGCTGCCAAGCATAGCAGCACCACACGGACATCTGAAATCATCAAATGTGCTGCTAGACGAGTCGTTAGAGCCGCTGCTTACGGATTACGGGCTAATCCCTGTGGCTAATGTAGAGCATGGACAGACATTAATGATGGCTTACAAATCACCCGAATACGCTCATCTCGGCCGTATAAGCAAGAAAACTGACGTATGGAGCTTCGGAATTCTGATACTGGAAATGCTAACAGGTAGGTTCCCAGAGAACTACTTGACACGAAATCACGACACGAAATCAGACCTAGCCACTTGGGTAAACAACATGATCAAGGAAAAGAAAACGTCGCTAGTGTTCGACGCAGAGCTAGGGCGAGCTAGGGAGAGCAACAAAGGCGAGCTGCTGAAGATGCTGAAGATTGCGTTGAGTTGCTGCGAGGAAGACGTGGAGAGAAGGCTGGACTTGAATCAGGTAGTGGCCCAAATTGAAGATCTGAACGACGCTGATTTGAGCGATAACGATGGAGATAACTTCGCTTCCACATCTCGCAACTCTCAAATGCCTGTTTGA 1980 48.69 MPTGVRVAGLMRAPAPTISAASSLFLFLYLFLYLSSSSLVLVLSAPSDTETLLEFKRSLTSARALRDWNPKVPPCNNNKPNWAGVLCLNGHVRGLRLENMGLKGEVNVDPLVSLSRMRTLSFMNNTLVGPWPSVIGKLRNLRSVYLSYNHFSGAIPDDAFTGMKFLKKVFLTNNEFNGQIPSSLASLSRLMELRLDGNKFRGQVPRLEMPSLKKLNVSNNELEGPIPRSLSHMDPSSFAGNRDLCGDPLPECERALISSAGLLKIAVIVIILGVTLAVIAAIFIIMNLRRQPALQLGKGNPGVIEEDQNKYMSSKPTTAVVGDGYRSTESSVAQAKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLISDFVDEGSLASHLHGNHNLEEPGIDWATRLKIIRGIARGMSYLYTSLPSIAAPHGHLKSSNVLLDESLEPLLTDYGLIPVANVEHGQTLMMAYKSPEYAHLGRISKKTDVWSFGILILEMLTGRFPENYLTRNHDTKSDLATWVNNMIKEKKTSLVFDAELGRARESNKGELLKMLKIALSCCEEDVERRLDLNQVVAQIEDLNDADLSDNDGDNFASTSRNSQMPV 659
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10250707 10252949 + CmoCh14G012030.1 Cmo14g01203 396469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01203 659 Pfam Leucine rich repeat 139 200 IPR001611 GO:0005515
Cmo14g01203 659 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Cmo14g01203 659 Pfam Leucine Rich Repeat 211 232 IPR001611 GO:0005515
Cmo14g01203 659 MobiDBLite consensus disorder prediction 643 659 - -
Cmo14g01203 659 Gene3D Transferase(Phosphotransferase) domain 1 436 644 - -
Cmo14g01203 659 Gene3D Phosphorylase Kinase; domain 1 326 435 - -
Cmo14g01203 659 SMART LRR_typ_2 209 240 IPR003591 -
Cmo14g01203 659 SMART LRR_typ_2 138 162 IPR003591 -
Cmo14g01203 659 Gene3D Ribonuclease Inhibitor 208 255 IPR032675 -
Cmo14g01203 659 ProSiteProfiles Protein kinase domain profile. 361 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cmo14g01203 659 MobiDBLite consensus disorder prediction 640 659 - -
Cmo14g01203 659 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 20 642 - -
Cmo14g01203 659 SUPERFAMILY L domain-like 46 233 - -
Cmo14g01203 659 Gene3D Ribonuclease Inhibitor 47 207 IPR032675 -
Cmo14g01203 659 Pfam Leucine rich repeat N-terminal domain 46 87 IPR013210 -
Cmo14g01203 659 SUPERFAMILY Protein kinase-like (PK-like) 365 634 IPR011009 -
Cmo14g01203 659 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 20 642 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo05g00643 Cmo-Chr5:3250527 Cmo14g01203 Cmo-Chr14:10250707 2.75E-172 dispersed
Cmo10g00371 Cmo-Chr10:1693944 Cmo14g01203 Cmo-Chr14:10250707 0 dispersed
Cmo11g00333 Cmo-Chr11:1627955 Cmo14g01203 Cmo-Chr14:10250707 0 dispersed
Cmo12g00228 Cmo-Chr12:1512980 Cmo14g01203 Cmo-Chr14:10250707 1.00E-164 dispersed
Cmo12g01363 Cmo-Chr12:11703610 Cmo14g01203 Cmo-Chr14:10250707 8.72E-147 dispersed
Cmo14g01203 Cmo-Chr14:10250707 Cmo04g01567 Cmo-Chr4:8011158 1.89E-108 dispersed
Cmo01g00001 Cmo-Chr1:3106 Cmo14g01203 Cmo-Chr14:10250707 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
74854 PF07714 PK_Tyr_Ser-Thr 2.20E-30 CL0016 Cmo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01203 - - csv:101203276 1029.24