Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmo14g01223 ATGGAGCCGTCTCATCAACTTTCACAAGCGCCCGAGGAGATTATTCTACGCTGGGACTCAGCTGCGCCGGAGGAACTGAAGGATAAGATGATTTTTGACTCAGATAGGGAAGAGATCGACCGATACTTGCAGGCCGTCGATGAAATCCAGAGGTCTATGTCGTCGGCTTCCATTTCCGACGATCAGAACAAAGTCGATTCCACTATGCAGATCGCCATGGCCAGGCTTGAGGATGAGTTCCGTTACATTCTGTCTAGTCATACCACTCCAATCGAGGTTGAGTCGCTTACTGATCCGAGTTCCTCTTCTCGCTCTATGTCCACTACTGAGAGTTGTGTATTCGAGGATGAAAACGACGAGGAAGCGGATTCGCAGGAAGTTCAGCTTGATTTAAGTAGCACTAGCAGTCCAAGGTTTGGGTCAAGTGGCCGATCGAGCTATCGGGCGATGAGTAGTATTCGTGAAATTGATCTGATACCTTCCGATGCGATTATCGATCTACGAAGTATTGCTGAGCGGATGATTACGGCGGGGTACCTGCGCGAGTGTATCCAAGTCTATGGCAGTGTGCGAAAGTCCACCTTCGACTCCAGCTTCCGACGTCTCGGAATTGAGAAACTGAGCATTGGAGATATCCAGAGGCTGGACTGGAATGAGCTGGAGATGAAGATCAGAAGGTGGATTAAAGCAGCAAAGGTTTCTATTAGGACCTTGTTTGCCAGTGAGAAGAAGCTCTGCGAGCAAATCTTTTACGGCATAGGGACAGCCATAGACGATGCTTGTTTCATGGAGACTGTAAAGGGCCCCGTGGTTCAGTTGTTTAATTTCGCCGAAGCGATCAGTATAAGCCGCAGATCGCCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTAACGGATTTGATTCCTGACATCGATGTGATATTCGATTCAAAATCAGCGGAATATATTCGGATTCAGACGGCGGAGATATTGTCGCGGTTGGCGGAGGCCGTCAGAGGGACTTTGTCGGAGTTTGAAAACGCGGTGATGCGAGATCCGTCTCTGCAGCCGGTTCCCGGTGGGACGCTTCATCCGTTGACAAGGTATGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACGTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCACAACCCCAGATATGGACTTCGCTGAGCTAGAGGGTAAAACGCCATTAGCGCTCCATCTTATATGGAGCATCGTGGTTCTGCAGTTCAATTTGGAGGGAAAGTCCAGGCACTACAGAGACCCTTCTCTAGCTCACCTATTCATTATGAACAACGTTCATTACATTGTTCAGAAGATAAAATTATCCCCAGAATTGCGAGAAATGATCGGAGACGTTTATCTGAAAAGGCTGACCGGGAAGTTCCGACGGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTGCGAAACGAAGGGTTGAATGTGGGCGGGAGCTTGTCTTCCGGCCCCGCAAAGAGCCTTATTAGAGAAAGATTCAAGACTTTCAATGCCATGTTTGAGGAGGTTCACAGGACACAATCAGCATGGTTGATACCAGACTCTCAGCTGAGGGAGGAGCTTCGCATATCCATAACTGAAAAGTTGATCCCAGCTTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAAGCACCCGGAAAATTACATCAAGTACTCGGTCGAGGAACTGGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCAGTAACCCATAACTTGAGAAGGAGATCCCACTGA 1839 48.99 MEPSHQLSQAPEEIILRWDSAAPEELKDKMIFDSDREEIDRYLQAVDEIQRSMSSASISDDQNKVDSTMQIAMARLEDEFRYILSSHTTPIEVESLTDPSSSSRSMSTTESCVFEDENDEEADSQEVQLDLSSTSSPRFGSSGRSSYRAMSSIREIDLIPSDAIIDLRSIAERMITAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELEMKIRRWIKAAKVSIRTLFASEKKLCEQIFYGIGTAIDDACFMETVKGPVVQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFDSKSAEYIRIQTAEILSRLAEAVRGTLSEFENAVMRDPSLQPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPTTPDMDFAELEGKTPLALHLIWSIVVLQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKLSPELREMIGDVYLKRLTGKFRRAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRERFKTFNAMFEEVHRTQSAWLIPDSQLREELRISITEKLIPAYRSFLGLHGHHIESGKHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH 612
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
14 10395134 10396972 - CmoCh14G012230.1 Cmo14g01223 396489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmo14g01223 612 MobiDBLite consensus disorder prediction 93 144 - -
Cmo14g01223 612 MobiDBLite consensus disorder prediction 93 112 - -
Cmo14g01223 612 Gene3D Exocyst complex component Exo70 14 608 - -
Cmo14g01223 612 SUPERFAMILY Cullin repeat-like 25 599 IPR016159 -
Cmo14g01223 612 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 611 - -
Cmo14g01223 612 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 611 IPR004140 GO:0000145|GO:0006887
Cmo14g01223 612 MobiDBLite consensus disorder prediction 127 144 - -
Cmo14g01223 612 Pfam Exo70 exocyst complex subunit 226 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cmo14g01223 Cmo17g00621 CCT
Cmo14g01223 Cmo17g00621 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmo07g01009 Cmo-Chr7:4983705 Cmo14g01223 Cmo-Chr14:10395134 3.14E-06 dispersed
Cmo10g00061 Cmo-Chr10:282379 Cmo14g01223 Cmo-Chr14:10395134 1.36E-151 dispersed
Cmo11g00037 Cmo-Chr11:157117 Cmo14g01223 Cmo-Chr14:10395134 4.42E-152 dispersed
Cmo13g00835 Cmo-Chr13:7754168 Cmo14g01223 Cmo-Chr14:10395134 1.06E-153 dispersed
Cmo13g01120 Cmo-Chr13:9132537 Cmo14g01223 Cmo-Chr14:10395134 1.10E-96 dispersed
Cmo14g01223 Cmo-Chr14:10395134 Cmo18g00956 Cmo-Chr18:10655880 6.72E-121 dispersed
Cmo20g00472 Cmo-Chr20:2180937 Cmo14g01223 Cmo-Chr14:10395134 5.39E-89 dispersed
Cmo01g00011 Cmo-Chr1:36167 Cmo14g01223 Cmo-Chr14:10395134 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmo14g01223 K07195 - csv:101204229 1096.65